Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 CLUHP1-201ENST00000435012 1190 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 PCBP2P1-201ENST00000437262 977 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AL353898.1-201ENST00000444055 238 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AL035407.2-201ENST00000454090 378 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC092757.1-201ENST00000467293 467 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 LARP1BP2-201ENST00000486594 519 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 ACTG1P13-201ENST00000486987 1043 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 MTND1P35-201ENST00000526739 508 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 YWHABP2-201ENST00000540201 713 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC093027.1-201ENST00000546698 429 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC125612.1-201ENST00000547580 377 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 CBX3P5-201ENST00000552017 521 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 BNIP3P22-201ENST00000593399 556 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC073091.2-201ENST00000603205 907 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AL139286.1-201ENST00000604465 483 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC015922.4-201ENST00000612568 690 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC136475.10-201ENST00000620253 385 ntBASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHKBP1Q8TBC3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 RARSP1-201ENST00000542842 1418 ntBASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHKBP1Q8TBC3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 METTL21EP-201ENST00000298105 713 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RNU1-150P-201ENST00000362491 162 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RNU6-839P-201ENST00000363347 108 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 Y_RNA.296-201ENST00000364930 108 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RN7SKP292-201ENST00000365522 317 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 MIR433-201ENST00000384837 93 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RPS21P8-201ENST00000413365 247 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AL096829.1-201ENST00000413677 457 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RPL12P16-201ENST00000431098 498 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 FMO7P-201ENST00000436045 768 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 SPRYD7P1-201ENST00000443861 570 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AL161636.2-201ENST00000445179 927 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 HMGB1P16-201ENST00000447155 540 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC108463.1-201ENST00000450258 347 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RPSAP39-201ENST00000467439 883 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RPL5P12-201ENST00000477071 851 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RN7SL273P-201ENST00000481561 299 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 RNA5SP116-201ENST00000516132 98 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 SNORA81.2-201ENST00000516868 170 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC027544.3-201ENST00000535082 757 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AL035413.2-201ENST00000604801 525 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 MEMO1P5-201ENST00000604810 406 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC005084.1-201ENST00000605160 304 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC011373.1-201ENST00000607270 237 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AP005431.1-201ENST00000618479 319 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC006065.6-201ENST00000625201 545 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC109315.1-201ENST00000584143 1347 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms