Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MIR6748-201ENST00000610433 71 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 STMN1P1-201ENST00000617809 440 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AC000374.1-201ENST00000434698 1745 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 AL731566.1-201ENST00000620490 1937 ntBASIC4.66□□□□□ -1.66
BEST3Q8N1M1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BEST3Q8N1M1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.65□□□□□ -1.66
BEST3Q8N1M1 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.65□□□□□ -1.66
BEST3Q8N1M1 AC019072.1-201ENST00000604535 1551 ntBASIC4.65□□□□□ -1.66
BEST3Q8N1M1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
BEST3Q8N1M1 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.65□□□□□ -1.66
BEST3Q8N1M1 AL450345.1-202ENST00000605741 3881 ntBASIC4.65□□□□□ -1.66
BEST3Q8N1M1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
BEST3Q8N1M1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
BEST3Q8N1M1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.65□□□□□ -1.66
BEST3Q8N1M1 AC133552.1-201ENST00000569988 4007 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 RN7SKP115-201ENST00000363177 317 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 MTATP6P20-201ENST00000414147 562 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 OSTCP5-201ENST00000425293 453 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 FTLP19-201ENST00000433300 394 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 RPL7P29-201ENST00000437151 728 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AP000936.3-201ENST00000438127 255 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 TCEA1P1-201ENST00000449716 880 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 SEPT7P3-201ENST00000455017 621 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 RNA5SP103-201ENST00000459503 118 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC091180.1-201ENST00000462104 372 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 RNA5SP303-201ENST00000516192 130 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 POLR2KP1-201ENST00000553226 168 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC009117.1-201ENST00000563948 554 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AP001160.4-201ENST00000596971 382 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AL157392.4-201ENST00000609756 345 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC024595.1-201ENST00000623088 387 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 LINC01808-202ENST00000641680 1116 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC097461.1-201ENST00000568928 2821 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 ZNF652P1-201ENST00000442420 1309 ntBASIC4.65□□□□□ -1.67
BEST3Q8N1M1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
BEST3Q8N1M1 AC073055.1-201ENST00000456901 1621 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 ZNF29P-201ENST00000225587 168 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 ENSAP3-201ENST00000312710 333 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 RNU6-543P-201ENST00000362576 108 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC092638.1-201ENST00000411966 1275 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 OR51A6P-201ENST00000418680 1004 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC246680.2-201ENST00000422106 389 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC008072.1-201ENST00000434254 824 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 GTF3AP5-201ENST00000442645 697 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms