Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 IMPA1P1-201ENST00000510718 842 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.675-201ENST00000516389 149 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.704-201ENST00000516851 102 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC116917.1-201ENST00000520558 305 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MIR3189-201ENST00000578735 73 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC011840.5-201ENST00000582125 771 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MIR4637-201ENST00000582405 84 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AL442067.2-201ENST00000614033 363 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC112487.2-201ENST00000637950 304 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 AC025125.1-201ENST00000624743 1922 ntBASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
UBE3DQ7Z6J8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC006210.2-201ENST00000367074 1545 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 CASC19-246ENST00000641625 1606 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 GAPDHP24-201ENST00000328713 983 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 RNU6-483P-201ENST00000384088 108 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AL034417.1-201ENST00000399343 800 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AL390316.1-201ENST00000406279 553 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 RN7SKP266-201ENST00000410232 287 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AMD1P2-201ENST00000412936 992 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AL136133.1-201ENST00000413694 376 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 COX6CP17-201ENST00000421389 185 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC007568.1-201ENST00000422912 471 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 FCF1P1-201ENST00000432690 571 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 NDUFA5P7-201ENST00000452914 242 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 FABP3P2-201ENST00000453169 399 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 RPS27AP3-201ENST00000453803 454 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 OR6K1P-201ENST00000456766 971 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 RN7SL369P-201ENST00000477138 299 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC007182.2-201ENST00000489251 402 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 HMGN1P16-201ENST00000508308 283 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC006499.2-201ENST00000513470 337 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 RNU6-1153P-201ENST00000516760 105 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC013828.2-201ENST00000532487 235 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC090751.1-201ENST00000566966 267 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC012507.3-201ENST00000603556 477 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.812-201ENST00000610788 101 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.784-201ENST00000613803 101 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.787-201ENST00000616522 101 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.780-201ENST00000617336 101 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.801-201ENST00000619005 101 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AL122023.1-201ENST00000622847 530 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms