Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC015914.2-201ENST00000618167 288 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 RNU4-6P-201ENST00000410804 122 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AL590806.1-201ENST00000415818 853 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AC004938.1-201ENST00000438468 308 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AC009963.4-201ENST00000448535 339 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AL451050.1-201ENST00000450126 415 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AC010374.1-201ENST00000503762 1237 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AC098799.1-201ENST00000504752 800 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 RN7SKP141-201ENST00000516167 338 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AP001486.1-201ENST00000463339 476 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AL139099.1-201ENST00000497398 403 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 FTH1P9-201ENST00000513251 355 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 RNU1-95P-201ENST00000516357 160 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 RNU1-128P-201ENST00000516704 160 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 HMGB2P1-201ENST00000591146 634 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AL031985.2-201ENST00000600955 480 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 AL160290.3-201ENST00000604869 165 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 RNU1-30P-201ENST00000606575 163 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.86□□□□□ -1.95
CSMD3Q7Z407 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD3Q7Z407 U1.1-201ENST00000384101 164 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 FCF1P5-201ENST00000406490 482 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 CEACAMP1-201ENST00000434624 1035 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 RPL7P9-201ENST00000468715 747 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 RNA5SP446-201ENST00000515955 82 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 MIR6715A-201ENST00000615929 79 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC116667.1-201ENST00000604855 2072 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 EI24P3-201ENST00000399046 1062 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 RPL7P58-201ENST00000402913 758 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 SNORA57.3-201ENST00000411095 141 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 TRIM60P17-201ENST00000415181 719 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC108032.1-201ENST00000416706 207 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC104333.2-201ENST00000422630 192 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC006011.1-201ENST00000442758 349 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 RPL23AP97-201ENST00000568955 471 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC016957.2-201ENST00000616998 848 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AP001273.1-201ENST00000624493 3152 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC062016.2-201ENST00000420950 676 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC127537.2-201ENST00000439258 465 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 GAS5-223ENST00000452197 483 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC017015.1-201ENST00000477387 286 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 RPL23AP37-201ENST00000479658 549 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 OR5B10P-201ENST00000532869 642 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AC091178.1-203ENST00000584586 279 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AL606490.9-201ENST00000603331 271 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AL049634.3-201ENST00000604968 457 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 MIR6868-201ENST00000611215 58 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms