Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC100871.1-201ENST00000507871 1456 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHFQ7M4L6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 POLR2KP1-201ENST00000553226 168 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 RPL10P14-201ENST00000565265 298 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 AL020997.3-201ENST00000602843 359 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC008536.1-201ENST00000602872 669 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC009948.4-201ENST00000604692 675 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 BNIP3P4-201ENST00000604946 565 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 VN1R74P-201ENST00000613259 503 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 AC022079.1-201ENST00000621546 602 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 AP001273.1-201ENST00000624493 3152 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.59□□□□□ -1.67
SHFQ7M4L6 CU459211.1-201ENST00000635667 749 ntBASIC4.59□□□□□ -1.67
SHFQ7M4L6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHFQ7M4L6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
SHFQ7M4L6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SHFQ7M4L6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SHFQ7M4L6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHFQ7M4L6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SHFQ7M4L6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 NEAT1-202ENST00000501122 22743 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 RNU4-92P-201ENST00000363783 136 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC013442.1-201ENST00000397347 228 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 RN7SKP247-201ENST00000411094 308 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC107081.1-201ENST00000414975 361 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AL133325.1-201ENST00000421090 382 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 RPL36AP10-201ENST00000421785 322 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC010099.3-201ENST00000423896 409 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 FAM96AP1-201ENST00000430879 482 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC009263.1-201ENST00000441193 1239 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 OTX2P1-201ENST00000450956 354 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 RPL7AP52-201ENST00000458096 790 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 RPL23AP37-201ENST00000479658 549 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 RPL23AP44-201ENST00000482216 473 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 snoZ278.1-201ENST00000517059 112 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 MTCO2P15-201ENST00000532655 656 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC027544.3-201ENST00000535082 757 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC005868.1-201ENST00000536421 331 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC022404.1-201ENST00000555320 273 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHFQ7M4L6 MTND3P13-201ENST00000574391 343 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.58□□□□□ -1.68
SHFQ7M4L6 PCNAP1-202ENST00000595299 752 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 VN1R78P-201ENST00000597393 564 ntBASIC4.58□□□□□ -1.68
SHFQ7M4L6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms