Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 SNORA31.9-201ENST00000516429 84 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 RNA5SP49-201ENST00000516450 115 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 AC106785.1-201ENST00000565935 262 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 MTND6P33-201ENST00000571794 183 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 MIR92B-201ENST00000607575 96 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 IQCB2P-201ENST00000401788 1633 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 MIR372-201ENST00000362225 67 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 AL445213.1-201ENST00000412589 747 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 RPS23P10-201ENST00000416185 486 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 EIF4EP1-201ENST00000422311 642 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 RPS20P4-201ENST00000461659 355 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 NPM1P29-201ENST00000483112 803 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 STMN1P2-201ENST00000508435 439 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 AL390334.1-201ENST00000556395 450 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 AL031666.3-201ENST00000609320 1006 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 ASNSP1-204ENST00000641977 1664 ntBASIC5.17□□□□□ -1.58
RFX7Q2KHR2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX7Q2KHR2 RNU1-14P-201ENST00000362759 152 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 CEACAMP1-201ENST00000434624 1035 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 MAPRE1P3-201ENST00000435438 796 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RPL23AP81-201ENST00000455252 467 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC022795.1-201ENST00000473808 480 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RNA5SP519-201ENST00000516480 119 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RNA5SP360-201ENST00000516555 118 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 IGLV3-26-201ENST00000520756 302 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 MIR6867-201ENST00000610636 67 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 MIR7151-201ENST00000617477 60 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 HCFC2P1-201ENST00000392864 1592 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC104118.1-201ENST00000607625 1589 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 VPS35P1-201ENST00000563400 1518 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 SPRR2C-201ENST00000290702 219 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RNU1-15P-201ENST00000353977 144 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RPL32P23-201ENST00000397237 405 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RN7SKP235-201ENST00000410662 305 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 EIF4A1P3-201ENST00000411521 244 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC002524.1-201ENST00000411687 547 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RAD23BP3-201ENST00000454157 1152 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 RNA5SP246-201ENST00000458909 119 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 MIR2116-201ENST00000517221 80 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.16□□□□□ -1.58
RFX7Q2KHR2 TMEM30CP-203ENST00000637814 1035 ntBASIC5.16□□□□□ -1.58
RFX7Q2KHR2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.58
RFX7Q2KHR2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFX7Q2KHR2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms