Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-610P-201ENST00000384264 107 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 SNORD96B-201ENST00000386148 79 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SCN1BQ07699 OR8V1P-201ENST00000395193 873 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 RPL22P22-201ENST00000395439 379 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 GLULP6-201ENST00000399502 913 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC004690.1-201ENST00000418216 328 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 EIF4HP2-201ENST00000424380 563 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.44□□□□□ -1.7
SCN1BQ07699 FO393414.1-201ENST00000428697 1184 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 FAM96AP1-201ENST00000430879 482 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.44□□□□□ -1.7
SCN1BQ07699 HMGB1P45-201ENST00000435986 653 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.44□□□□□ -1.7
SCN1BQ07699 MTND1P33-201ENST00000446251 917 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AL096829.2-201ENST00000446582 742 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AL162388.1-201ENST00000450912 352 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC117394.1-201ENST00000477323 567 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 RN7SL817P-201ENST00000480777 288 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC126121.1-201ENST00000482313 553 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 TPT1P3-201ENST00000492841 512 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 NDUFB4P12-201ENST00000513465 390 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.44□□□□□ -1.7
SCN1BQ07699 MTND2P7-201ENST00000521337 640 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.44□□□□□ -1.7
SCN1BQ07699 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN1BQ07699 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC116553.2-201ENST00000564203 463 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AC005191.1-201ENST00000603950 358 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC010680.3-201ENST00000604215 520 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC104695.2-201ENST00000605056 775 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC092574.1-201ENST00000609771 420 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC126175.1-201ENST00000617041 758 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 MIR6864-201ENST00000617935 70 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC118658.2-201ENST00000618697 459 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.44□□□□□ -1.7
SCN1BQ07699 AL023881.1-201ENST00000621088 301 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC140113.4-201ENST00000622087 222 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AC055839.1-201ENST00000634467 498 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 LINC01808-202ENST00000641680 1116 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN1BQ07699 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 MFSD8-220ENST00000641243 1422 ntBASIC4.44□□□□□ -1.7
SCN1BQ07699 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN1BQ07699 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SCN1BQ07699 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.43□□□□□ -1.7
SCN1BQ07699 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 NSRP1P1-201ENST00000444067 1693 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC016716.1-201ENST00000265882 708 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AL512646.1-201ENST00000269395 1077 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SCN1BQ07699 RNA5SP335-201ENST00000363817 110 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 RNA5SP234-201ENST00000363916 119 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SCN1BQ07699 SNORA51.12-201ENST00000384448 134 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 MIR195-201ENST00000385194 87 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SCN1BQ07699 SNORD65C-201ENST00000390962 71 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 RNA5SP178-201ENST00000410380 128 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC246680.2-201ENST00000422106 389 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 RPS29P14-201ENST00000431518 171 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC004865.1-201ENST00000442276 1003 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AL929288.2-201ENST00000446368 407 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AC005002.1-201ENST00000447458 540 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 RPL23AP15-201ENST00000450202 459 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 NDUFS5P3-201ENST00000450668 321 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AC008280.2-201ENST00000455473 307 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 RPL37P6-202ENST00000464216 403 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 RPL7P6-201ENST00000480903 738 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 PPIAP19-201ENST00000486414 492 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 RN7SL547P-201ENST00000490793 290 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms