Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 FP325313.1-201ENST00000638228 703 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS1Q01581 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS1Q01581 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 RAD17P1-201ENST00000418130 2042 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 RNU6-178P-201ENST00000384631 104 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 MIR3065-201ENST00000390137 79 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 RNA5SP332-201ENST00000391063 115 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC006065.1-201ENST00000422539 802 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 DYNLL1P7-201ENST00000429273 258 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 CEACAMP9-201ENST00000442990 513 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 DHFRP3-201ENST00000455595 559 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 NDUFA12P1-201ENST00000455914 406 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC111000.3-201ENST00000508057 576 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC022882.1-201ENST00000532142 501 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 GLRXP2-201ENST00000555594 321 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC084783.1-201ENST00000565846 910 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC079587.1-201ENST00000603846 277 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC007546.1-201ENST00000619452 559 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AP000346.3-201ENST00000622821 210 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 AC079298.2-201ENST00000623885 459 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HMGCS1Q01581 AL132640.2-201ENST00000559968 1698 ntBASIC4.18□□□□□ -1.74
HMGCS1Q01581 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS1Q01581 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 Z98755.1-201ENST00000407015 1384 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 TMSB10P2-201ENST00000416049 131 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 EIF4EP1-201ENST00000422311 642 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 NDUFA5P1-201ENST00000433858 341 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AL035551.1-201ENST00000446931 348 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC093720.1-201ENST00000505681 714 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 RNA5SP360-201ENST00000516555 118 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC119501.1-201ENST00000603646 475 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC093765.1-201ENST00000603758 881 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AL031666.3-201ENST00000609320 1006 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AP005019.3-201ENST00000620418 560 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AC091046.3-201ENST00000631455 1574 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS1Q01581 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCS1Q01581 AL592148.3-201ENST00000608771 2646 ntBASIC4.17□□□□□ -1.74
HMGCS1Q01581 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms