Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MIR23B-201ENST00000384832 97 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
CCNA1P78396 MTND2P2-201ENST00000434633 945 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AL353597.2-202ENST00000434901 373 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AC044797.1-201ENST00000445744 679 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.11□□□□□ -1.59
CCNA1P78396 AL354710.1-201ENST00000453641 246 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 RPL7AP52-201ENST00000458096 790 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AC090686.1-201ENST00000481577 749 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 UBA52P3-201ENST00000491303 382 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.11□□□□□ -1.59
CCNA1P78396 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCNA1P78396 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.11□□□□□ -1.59
CCNA1P78396 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.11□□□□□ -1.59
CCNA1P78396 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.11□□□□□ -1.59
CCNA1P78396 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.11□□□□□ -1.59
CCNA1P78396 BPIFA4P-203ENST00000603168 689 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.11□□□□□ -1.59
CCNA1P78396 AL592494.3-201ENST00000609485 464 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 MIR8059-201ENST00000620427 81 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.11□□□□□ -1.59
CCNA1P78396 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCNA1P78396 AL445437.1-201ENST00000623157 3087 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AC100778.3-201ENST00000580060 1750 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.11□□□□□ -1.59
CCNA1P78396 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.11□□□□□ -1.59
CCNA1P78396 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNA1P78396 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNA1P78396 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNA1P78396 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNA1P78396 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNA1P78396 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCNA1P78396 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCNA1P78396 EIF4A1P3-201ENST00000411521 244 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNA1P78396 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNA1P78396 CASP3P1-201ENST00000446037 609 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNA1P78396 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 RPS27AP17-201ENST00000463344 455 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 RPL35P6-201ENST00000490024 372 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.1□□□□□ -1.59
CCNA1P78396 MED28P5-201ENST00000528254 438 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 HNRNPRP2-201ENST00000528421 743 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNA1P78396 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNA1P78396 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.1□□□□□ -1.59
CCNA1P78396 AGGF1P6-201ENST00000569213 976 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 RNF138P2-201ENST00000603490 592 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 AC079587.1-201ENST00000603846 277 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 AC015922.4-201ENST00000612568 690 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNA1P78396 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCNA1P78396 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 OR51H2P-202ENST00000641424 3046 ntBASIC5.1□□□□□ -1.59
CCNA1P78396 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCNA1P78396 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNA1P78396 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCNA1P78396 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CCNA1P78396 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
CCNA1P78396 AL451142.2-201ENST00000429076 2090 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNA1P78396 PHKBP1-201ENST00000450951 1951 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.09□□□□□ -1.59
CCNA1P78396 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNA1P78396 AL355852.1-201ENST00000454081 1771 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNA1P78396 SPRR2C-201ENST00000290702 219 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CCNA1P78396 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNA1P78396 AC093719.1-202ENST00000392735 373 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNA1P78396 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.09□□□□□ -1.59
CCNA1P78396 FCF1P5-201ENST00000406490 482 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.09□□□□□ -1.59
CCNA1P78396 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCNA1P78396 CKS1BP6-201ENST00000424932 240 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 RPL23AP4-201ENST00000427757 463 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 AL132765.1-201ENST00000434165 553 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 HMGB3P9-201ENST00000441799 583 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 OR6C72P-201ENST00000451403 892 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 MTCYBP14-201ENST00000457471 715 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNA1P78396 RN7SL812P-201ENST00000493791 279 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.09□□□□□ -1.59
CCNA1P78396 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.09□□□□□ -1.59
CCNA1P78396 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.09□□□□□ -1.59
CCNA1P78396 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.09□□□□□ -1.59
CCNA1P78396 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.09□□□□□ -1.59
CCNA1P78396 AC131238.1-201ENST00000617135 328 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 AC008785.1-201ENST00000624475 456 ntBASIC5.09□□□□□ -1.59
CCNA1P78396 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CCNA1P78396 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms