Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC006518.2-201ENST00000542513 940 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC125611.1-201ENST00000549563 229 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC126177.5-201ENST00000549599 178 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.55□□□□□ -1.68
SEC61A1P61619 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A1P61619 MTCYBP28-201ENST00000566728 1132 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC016180.1-201ENST00000567945 403 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A1P61619 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A1P61619 AC011840.5-201ENST00000582125 771 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 PIGPP4-201ENST00000584447 307 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC015688.2-201ENST00000584523 262 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 OR7E18P-201ENST00000592589 702 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A1P61619 Z99497.2-201ENST00000603634 310 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC018618.2-201ENST00000604770 446 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC011374.2-201ENST00000607135 526 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC024257.5-201ENST00000612739 531 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A1P61619 BX005214.3-202ENST00000619809 325 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 MIR6837-201ENST00000620884 64 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 MIR6719-201ENST00000622428 87 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 AC068620.4-201ENST00000636730 1182 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A1P61619 C4BPAP1-201ENST00000415474 1893 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SEC61A1P61619 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A1P61619 PABPC1P6-201ENST00000445594 1829 ntBASIC4.55□□□□□ -1.68
SEC61A1P61619 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A1P61619 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.55□□□□□ -1.68
SEC61A1P61619 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A1P61619 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SEC61A1P61619 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SEC61A1P61619 SNORD65C-201ENST00000390962 71 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 DPPA2P3-201ENST00000411853 655 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AL133325.1-201ENST00000421090 382 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AC124944.2-201ENST00000429866 1242 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 MOB1AP1-201ENST00000430903 535 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.54□□□□□ -1.68
SEC61A1P61619 THAP5P1-201ENST00000439089 262 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 SEPT14P24-201ENST00000447236 180 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AC105399.1-202ENST00000447303 205 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.54□□□□□ -1.68
SEC61A1P61619 RPL7P32-201ENST00000457119 744 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AC004815.1-201ENST00000484185 331 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AC008638.1-201ENST00000506035 866 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AC109464.1-201ENST00000511091 819 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.54□□□□□ -1.68
SEC61A1P61619 RNA5SP464-201ENST00000516251 108 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 RNA5SP92-201ENST00000516437 110 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 IGLV2-28-201ENST00000520681 304 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A1P61619 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AC022884.2-201ENST00000578535 580 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AP002906.1-201ENST00000603405 233 ntBASIC4.54□□□□□ -1.68
SEC61A1P61619 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SEC61A1P61619 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A1P61619 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SEC61A1P61619 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A1P61619 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SEC61A1P61619 Z98755.1-201ENST00000407015 1384 ntBASIC4.53□□□□□ -1.68
SEC61A1P61619 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SEC61A1P61619 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A1P61619 MAPK10-349ENST00000641767 3661 ntBASIC4.53□□□□□ -1.68
SEC61A1P61619 RN7SKP153-201ENST00000365026 316 ntBASIC4.53□□□□□ -1.68
SEC61A1P61619 SNORD116-1-201ENST00000384335 95 ntBASIC4.53□□□□□ -1.68
SEC61A1P61619 MIR320B1-201ENST00000390209 79 ntBASIC4.53□□□□□ -1.68
SEC61A1P61619 OR4K12P-201ENST00000406538 961 ntBASIC4.53□□□□□ -1.68
SEC61A1P61619 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.53□□□□□ -1.68
SEC61A1P61619 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.53□□□□□ -1.68
SEC61A1P61619 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.53□□□□□ -1.68
SEC61A1P61619 AL356320.2-201ENST00000417263 507 ntBASIC4.53□□□□□ -1.68
SEC61A1P61619 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.53□□□□□ -1.68
SEC61A1P61619 SRSF1P1-201ENST00000424058 520 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms