Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 RPL23P2-201ENST00000320371 421 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 RNA5SP22-201ENST00000365393 109 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.71□□□□□ -1.82
SPCS3P61009 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SPCS3P61009 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 RN7SKP267-201ENST00000410381 285 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC009237.5-201ENST00000414271 501 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.71□□□□□ -1.82
SPCS3P61009 UBTFL3-201ENST00000418934 1024 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC073464.3-201ENST00000422564 712 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC092832.1-201ENST00000422934 400 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.71□□□□□ -1.82
SPCS3P61009 CENPIP1-201ENST00000425713 902 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC079807.1-201ENST00000429993 481 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 ELOCP18-201ENST00000434209 337 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 RPS26P40-201ENST00000435209 294 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 RPL23AP62-201ENST00000463396 453 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 RN7SL174P-201ENST00000475578 289 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 UBTFL6-201ENST00000477929 1024 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC008897.1-201ENST00000494006 347 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 ATP5LP3-201ENST00000514223 304 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 RN7SKP147-201ENST00000517154 244 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.71□□□□□ -1.82
SPCS3P61009 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.71□□□□□ -1.82
SPCS3P61009 IGLV3-26-201ENST00000520756 302 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC013701.1-201ENST00000522657 465 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.71□□□□□ -1.82
SPCS3P61009 AC023762.1-201ENST00000603280 584 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC103792.1-201ENST00000603591 919 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AP000864.1-201ENST00000609424 650 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC116651.1-201ENST00000609724 556 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AL353726.1-201ENST00000614041 1000 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 AC233309.1-201ENST00000619522 751 ntBASIC3.71□□□□□ -1.82
SPCS3P61009 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.71□□□□□ -1.82
SPCS3P61009 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.71□□□□□ -1.82
SPCS3P61009 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SPCS3P61009 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.71□□□□□ -1.82
SPCS3P61009 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPCS3P61009 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 AC135352.1-201ENST00000506173 1418 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SPCS3P61009 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.7□□□□□ -1.82
SPCS3P61009 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 AC132825.1-201ENST00000463573 2247 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.7□□□□□ -1.82
SPCS3P61009 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.7□□□□□ -1.82
SPCS3P61009 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 SNORA74A-201ENST00000364089 198 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 RN7SKP15-201ENST00000364742 309 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 RNU1-44P-201ENST00000384453 163 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 RAB5CP1-201ENST00000395972 580 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.7□□□□□ -1.82
SPCS3P61009 AC062016.2-201ENST00000420950 676 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.7□□□□□ -1.82
SPCS3P61009 CYCSP11-201ENST00000436426 315 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 AC092647.3-201ENST00000443044 633 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.7□□□□□ -1.82
SPCS3P61009 RPS27AP15-201ENST00000447672 466 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 AL935212.3-201ENST00000450729 284 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 ISCUP1-201ENST00000454451 448 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.7□□□□□ -1.82
SPCS3P61009 AC090013.1-201ENST00000485147 480 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 AP001086.1-201ENST00000494882 321 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.7□□□□□ -1.82
SPCS3P61009 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.7□□□□□ -1.82
SPCS3P61009 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.7□□□□□ -1.82
SPCS3P61009 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.7□□□□□ -1.82
SPCS3P61009 AL161912.3-201ENST00000605404 628 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
SPCS3P61009 AC100871.1-201ENST00000507871 1456 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SPCS3P61009 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.7□□□□□ -1.82
SPCS3P61009 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPCS3P61009 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.7□□□□□ -1.82
SPCS3P61009 AC110792.3-201ENST00000595906 1614 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 AL391684.1-202ENST00000641293 1636 ntBASIC3.7□□□□□ -1.82
SPCS3P61009 AC025031.4-201ENST00000621248 3271 ntBASIC3.69□□□□□ -1.82
SPCS3P61009 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SPCS3P61009 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SPCS3P61009 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SPCS3P61009 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.69□□□□□ -1.82
SPCS3P61009 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SPCS3P61009 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SPCS3P61009 AC097504.1-201ENST00000515103 2415 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms