Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH13P55290 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.69□□□□□ -1.66
CDH13P55290 AC015726.3-201ENST00000624501 418 ntBASIC4.69□□□□□ -1.66
CDH13P55290 AL353662.3-201ENST00000625131 237 ntBASIC4.69□□□□□ -1.66
CDH13P55290 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.69□□□□□ -1.66
CDH13P55290 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH13P55290 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CDH13P55290 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH13P55290 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CDH13P55290 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CDH13P55290 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 AC099654.2-201ENST00000433031 1980 ntBASIC4.69□□□□□ -1.66
CDH13P55290 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CDH13P55290 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH13P55290 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH13P55290 AC009229.4-201ENST00000623854 1947 ntBASIC4.68□□□□□ -1.66
CDH13P55290 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH13P55290 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH13P55290 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 BMS1P3-201ENST00000372011 932 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AC093719.1-202ENST00000392735 373 ntBASIC4.68□□□□□ -1.66
CDH13P55290 ARL4AP5-201ENST00000404372 599 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AL355615.1-201ENST00000406187 641 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AL024507.1-201ENST00000412741 274 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH13P55290 AC013262.1-201ENST00000426710 252 ntBASIC4.68□□□□□ -1.66
CDH13P55290 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 RPS17P8-201ENST00000434525 335 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH13P55290 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH13P55290 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH13P55290 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH13P55290 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH13P55290 AC022795.1-201ENST00000473808 480 ntBASIC4.68□□□□□ -1.66
CDH13P55290 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CDH13P55290 AL161747.1-201ENST00000480068 358 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AC008953.1-201ENST00000497334 318 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH13P55290 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CDH13P55290 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH13P55290 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH13P55290 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH13P55290 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH13P55290 AC007225.2-201ENST00000562529 256 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH13P55290 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH13P55290 AC011453.2-201ENST00000603737 729 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AL121932.1-201ENST00000605542 214 ntBASIC4.68□□□□□ -1.66
CDH13P55290 MIR6862-1-201ENST00000613016 70 ntBASIC4.68□□□□□ -1.66
CDH13P55290 MIR6862-2-201ENST00000614755 70 ntBASIC4.68□□□□□ -1.66
CDH13P55290 U6.48-201ENST00000618523 106 ntBASIC4.68□□□□□ -1.66
CDH13P55290 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH13P55290 AC024595.1-201ENST00000623088 387 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AP003476.1-201ENST00000623984 516 ntBASIC4.68□□□□□ -1.66
CDH13P55290 AL355480.1-201ENST00000629041 99 ntBASIC4.68□□□□□ -1.66
CDH13P55290 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH13P55290 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH13P55290 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH13P55290 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 DHX9P1-201ENST00000436565 3076 ntBASIC4.68□□□□□ -1.66
CDH13P55290 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CDH13P55290 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH13P55290 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH13P55290 TLK1P1-201ENST00000456760 2440 ntBASIC4.67□□□□□ -1.66
CDH13P55290 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH13P55290 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH13P55290 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH13P55290 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH13P55290 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH13P55290 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH13P55290 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH13P55290 RNU6-543P-201ENST00000362576 108 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AL080315.1-201ENST00000406055 466 ntBASIC4.67□□□□□ -1.66
CDH13P55290 HMGB3P18-201ENST00000406327 590 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 UBE2V1P9-201ENST00000414760 368 ntBASIC4.67□□□□□ -1.66
CDH13P55290 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH13P55290 DEFB130D-201ENST00000426866 237 ntBASIC4.67□□□□□ -1.66
CDH13P55290 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH13P55290 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH13P55290 RPL7P11-201ENST00000437586 658 ntBASIC4.67□□□□□ -1.66
CDH13P55290 RPS26P2-201ENST00000440331 348 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH13P55290 TPMTP4-201ENST00000450749 678 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH13P55290 RPS6P2-201ENST00000454208 705 ntBASIC4.67□□□□□ -1.66
CDH13P55290 GTF2IP12-201ENST00000456547 356 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms