Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH4P55283 BMS1P7-201ENST00000602440 1052 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AL023583.1-201ENST00000607518 1143 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AP002360.3-201ENST00000607673 710 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AL121873.1-201ENST00000616013 524 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AL023881.1-201ENST00000621088 301 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AC092159.4-201ENST00000624944 550 ntBASIC4.57□□□□□ -1.68
CDH4P55283 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDH4P55283 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH4P55283 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH4P55283 AC107027.3-201ENST00000565095 3473 ntBASIC4.56□□□□□ -1.68
CDH4P55283 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CDH4P55283 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.56□□□□□ -1.68
CDH4P55283 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CDH4P55283 OR5P1P-201ENST00000299512 925 ntBASIC4.56□□□□□ -1.68
CDH4P55283 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 MIR141-201ENST00000384975 95 ntBASIC4.56□□□□□ -1.68
CDH4P55283 ATP5F1P2-201ENST00000398143 760 ntBASIC4.56□□□□□ -1.68
CDH4P55283 SNRPFP1-201ENST00000414761 252 ntBASIC4.56□□□□□ -1.68
CDH4P55283 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH4P55283 AL590806.1-201ENST00000415818 853 ntBASIC4.56□□□□□ -1.68
CDH4P55283 OR6K4P-201ENST00000423179 955 ntBASIC4.56□□□□□ -1.68
CDH4P55283 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH4P55283 AC023141.6-201ENST00000429418 337 ntBASIC4.56□□□□□ -1.68
CDH4P55283 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH4P55283 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH4P55283 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH4P55283 RPL7P33-201ENST00000444159 742 ntBASIC4.56□□□□□ -1.68
CDH4P55283 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH4P55283 EIF2S2P2-201ENST00000447161 982 ntBASIC4.56□□□□□ -1.68
CDH4P55283 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH4P55283 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH4P55283 DHFRP3-201ENST00000455595 559 ntBASIC4.56□□□□□ -1.68
CDH4P55283 RPL23AP24-201ENST00000458203 385 ntBASIC4.56□□□□□ -1.68
CDH4P55283 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 RN7SL810P-201ENST00000493031 276 ntBASIC4.56□□□□□ -1.68
CDH4P55283 CEACAMP10-202ENST00000495431 496 ntBASIC4.56□□□□□ -1.68
CDH4P55283 AC025674.1-201ENST00000507074 324 ntBASIC4.56□□□□□ -1.68
CDH4P55283 OR51K1P-201ENST00000510214 950 ntBASIC4.56□□□□□ -1.68
CDH4P55283 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH4P55283 NPM1P6-201ENST00000521088 871 ntBASIC4.56□□□□□ -1.68
CDH4P55283 HIGD1AP5-201ENST00000529959 259 ntBASIC4.56□□□□□ -1.68
CDH4P55283 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 RPL7P50-201ENST00000600588 727 ntBASIC4.56□□□□□ -1.68
CDH4P55283 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH4P55283 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH4P55283 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH4P55283 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH4P55283 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CDH4P55283 AC007342.7-201ENST00000624610 2337 ntBASIC4.56□□□□□ -1.68
CDH4P55283 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH4P55283 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH4P55283 AP001002.1-201ENST00000625148 1513 ntBASIC4.56□□□□□ -1.68
CDH4P55283 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH4P55283 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH4P55283 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CDH4P55283 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDH4P55283 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 AC019155.1-201ENST00000382242 574 ntBASIC4.55□□□□□ -1.68
CDH4P55283 RNU6-178P-201ENST00000384631 104 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AC093719.1-202ENST00000392735 373 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH4P55283 AJ239321.1-201ENST00000424255 564 ntBASIC4.55□□□□□ -1.68
CDH4P55283 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 AC114495.1-201ENST00000441274 436 ntBASIC4.55□□□□□ -1.68
CDH4P55283 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH4P55283 DDX39BP2-208ENST00000453923 258 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH4P55283 RN7SL98P-201ENST00000462271 300 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AC104629.2-201ENST00000468627 598 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH4P55283 OR8G5-201ENST00000524943 1041 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH4P55283 CYCSP28-201ENST00000534284 321 ntBASIC4.55□□□□□ -1.68
CDH4P55283 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.55□□□□□ -1.68
CDH4P55283 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH4P55283 AC027455.1-201ENST00000574104 594 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AC079587.1-201ENST00000603846 277 ntBASIC4.55□□□□□ -1.68
CDH4P55283 AL353600.1-201ENST00000608148 251 ntBASIC4.55□□□□□ -1.68
CDH4P55283 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH4P55283 AC009704.2-201ENST00000618739 483 ntBASIC4.55□□□□□ -1.68
CDH4P55283 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH4P55283 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH4P55283 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
CDH4P55283 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH4P55283 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CDH4P55283 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH4P55283 AP001273.1-201ENST00000624493 3152 ntBASIC4.55□□□□□ -1.68
CDH4P55283 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH4P55283 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH4P55283 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms