Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.9□□□□□ -1.46
CLTCL1P53675 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CLTCL1P53675 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.9□□□□□ -1.46
CLTCL1P53675 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.9□□□□□ -1.46
CLTCL1P53675 MTND4LP31-201ENST00000514859 294 ntBASIC5.9□□□□□ -1.46
CLTCL1P53675 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.9□□□□□ -1.46
CLTCL1P53675 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.9□□□□□ -1.46
CLTCL1P53675 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.9□□□□□ -1.46
CLTCL1P53675 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.9□□□□□ -1.46
CLTCL1P53675 MIR5685-201ENST00000579080 79 ntBASIC5.9□□□□□ -1.46
CLTCL1P53675 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.9□□□□□ -1.46
CLTCL1P53675 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.9□□□□□ -1.46
CLTCL1P53675 AC090912.3-201ENST00000609775 533 ntBASIC5.9□□□□□ -1.46
CLTCL1P53675 MIR6868-201ENST00000611215 58 ntBASIC5.9□□□□□ -1.46
CLTCL1P53675 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLTCL1P53675 EIF3EP2-201ENST00000423042 1814 ntBASIC5.9□□□□□ -1.47
CLTCL1P53675 AC106871.1-201ENST00000568324 3102 ntBASIC5.9□□□□□ -1.47
CLTCL1P53675 AL929601.4-201ENST00000613011 1341 ntBASIC5.9□□□□□ -1.47
CLTCL1P53675 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLTCL1P53675 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
CLTCL1P53675 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 AC016588.2-201ENST00000632484 3021 ntBASIC5.89□□□□□ -1.47
CLTCL1P53675 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 RNA5SP399-201ENST00000364003 117 ntBASIC5.89□□□□□ -1.47
CLTCL1P53675 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.89□□□□□ -1.47
CLTCL1P53675 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.89□□□□□ -1.47
CLTCL1P53675 RPL12P18-201ENST00000437175 325 ntBASIC5.89□□□□□ -1.47
CLTCL1P53675 NOTCH2P1-201ENST00000443481 624 ntBASIC5.89□□□□□ -1.47
CLTCL1P53675 FCF1P7-201ENST00000451185 558 ntBASIC5.89□□□□□ -1.47
CLTCL1P53675 RPL23AP65-201ENST00000475608 468 ntBASIC5.89□□□□□ -1.47
CLTCL1P53675 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.89□□□□□ -1.47
CLTCL1P53675 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.89□□□□□ -1.47
CLTCL1P53675 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.89□□□□□ -1.47
CLTCL1P53675 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.89□□□□□ -1.47
CLTCL1P53675 AC064801.1-201ENST00000612025 407 ntBASIC5.89□□□□□ -1.47
CLTCL1P53675 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.89□□□□□ -1.47
CLTCL1P53675 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLTCL1P53675 OR4A15-201ENST00000314706 1035 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 RN7SKP97-201ENST00000410966 333 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 AC004448.2-201ENST00000422360 586 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.88□□□□□ -1.47
CLTCL1P53675 SKP1P3-201ENST00000429280 487 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 AL035246.1-201ENST00000433554 1255 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 EIF2S2P5-201ENST00000457635 968 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.88□□□□□ -1.47
CLTCL1P53675 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.88□□□□□ -1.47
CLTCL1P53675 AC097505.1-201ENST00000610199 565 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 AC004777.1-201ENST00000624317 287 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.88□□□□□ -1.47
CLTCL1P53675 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
CLTCL1P53675 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.88□□□□□ -1.47
CLTCL1P53675 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLTCL1P53675 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.88□□□□□ -1.47
CLTCL1P53675 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.88□□□□□ -1.47
CLTCL1P53675 RPL6P5-201ENST00000445678 828 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.88□□□□□ -1.47
CLTCL1P53675 RPL29P14-201ENST00000495837 428 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.88□□□□□ -1.47
CLTCL1P53675 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 AC107993.1-201ENST00000591343 684 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 AC099669.2-201ENST00000616549 437 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 AL138721.1-201ENST00000616756 179 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 FP236240.3-201ENST00000623061 327 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 AP003400.2-201ENST00000624036 666 ntBASIC5.88□□□□□ -1.47
CLTCL1P53675 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLTCL1P53675 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.87□□□□□ -1.47
CLTCL1P53675 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLTCL1P53675 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLTCL1P53675 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLTCL1P53675 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLTCL1P53675 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLTCL1P53675 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CLTCL1P53675 AC093578.1-201ENST00000415219 368 ntBASIC5.87□□□□□ -1.47
CLTCL1P53675 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.87□□□□□ -1.47
CLTCL1P53675 RPL37P1-201ENST00000432310 284 ntBASIC5.87□□□□□ -1.47
CLTCL1P53675 RAD23BP3-201ENST00000454157 1152 ntBASIC5.87□□□□□ -1.47
CLTCL1P53675 AC092691.2-201ENST00000461787 803 ntBASIC5.87□□□□□ -1.47
CLTCL1P53675 AC108022.1-201ENST00000493466 478 ntBASIC5.87□□□□□ -1.47
CLTCL1P53675 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.87□□□□□ -1.47
CLTCL1P53675 PHBP17-201ENST00000528576 541 ntBASIC5.87□□□□□ -1.47
CLTCL1P53675 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.87□□□□□ -1.47
CLTCL1P53675 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.87□□□□□ -1.47
CLTCL1P53675 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.87□□□□□ -1.47
CLTCL1P53675 SNORD91B-202ENST00000608459 222 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms