Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 AC099654.2-201ENST00000433031 1980 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AP001642.1-201ENST00000624727 2117 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 OR14L1P-202ENST00000641545 3009 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LIMK1P53667 RPL21P67-201ENST00000402896 478 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AL359643.1-201ENST00000404109 423 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 RN7SKP16-201ENST00000410180 299 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AC105402.1-201ENST00000413336 545 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 TATDN1P1-201ENST00000414123 891 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.93□□□□□ -1.62
LIMK1P53667 IPMKP1-201ENST00000425988 855 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 DPY19L1P2-201ENST00000426647 915 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 AL160175.1-201ENST00000428124 247 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.93□□□□□ -1.62
LIMK1P53667 AC093414.1-201ENST00000434712 514 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AC005154.2-201ENST00000438110 379 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 BTF3P6-201ENST00000448054 499 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 RPL23AP23-201ENST00000452590 471 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AURKAPS2-201ENST00000454983 333 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 RPL23AP12-201ENST00000467573 473 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 OR52A4P-201ENST00000472867 958 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 RWDD4P1-201ENST00000488019 565 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 RNU6-1102P-201ENST00000516149 96 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 SNORA76.2-201ENST00000517095 137 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AP001880.2-201ENST00000538233 448 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AC008083.2-201ENST00000546707 476 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 DYNLL1P4-201ENST00000549314 266 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 AC025918.2-201ENST00000558683 763 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 MIR4472-2-201ENST00000582069 67 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 MIR4512-201ENST00000583257 77 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.93□□□□□ -1.62
LIMK1P53667 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 AC020910.3-201ENST00000603701 874 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AC098935.2-201ENST00000604222 466 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 MIR92B-201ENST00000607575 96 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AC034229.5-201ENST00000624258 185 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AC011944.2-201ENST00000624440 683 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.93□□□□□ -1.62
LIMK1P53667 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.93□□□□□ -1.62
LIMK1P53667 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
LIMK1P53667 AL672167.1-204ENST00000641875 3017 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
LIMK1P53667 SCARNA15-201ENST00000607520 4325 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.93□□□□□ -1.62
LIMK1P53667 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIMK1P53667 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.92□□□□□ -1.62
LIMK1P53667 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LIMK1P53667 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
LIMK1P53667 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.92□□□□□ -1.62
LIMK1P53667 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LIMK1P53667 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 ATP5F1P2-201ENST00000398143 760 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 RPL31P52-201ENST00000407532 367 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.92□□□□□ -1.62
LIMK1P53667 RPL7P57-201ENST00000423238 740 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 BMS1P19-201ENST00000433925 393 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.92□□□□□ -1.62
LIMK1P53667 HMGB3P21-201ENST00000452483 547 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 Z95152.1-201ENST00000453556 656 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.92□□□□□ -1.62
LIMK1P53667 RPL12P20-201ENST00000475538 479 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.92□□□□□ -1.62
LIMK1P53667 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 RPL23AP73-201ENST00000492507 471 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 AC093840.1-201ENST00000511599 336 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 AC027338.1-201ENST00000514840 825 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 RNU6-467P-201ENST00000517027 110 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms