Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 AC127024.5-201ENST00000580085 462 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC009948.4-201ENST00000604692 675 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.42□□□□□ -1.54
COPAP53621 AC009163.6-201ENST00000612367 342 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC010975.3-201ENST00000618727 978 ntBASIC5.42□□□□□ -1.54
COPAP53621 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.42□□□□□ -1.54
COPAP53621 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 AC104623.2-202ENST00000623477 4002 ntBASIC5.42□□□□□ -1.54
COPAP53621 DDX18P4-201ENST00000511690 1966 ntBASIC5.42□□□□□ -1.54
COPAP53621 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 AC111188.2-201ENST00000529697 1387 ntBASIC5.42□□□□□ -1.54
COPAP53621 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 AL034549.2-201ENST00000618285 3373 ntBASIC5.41□□□□□ -1.54
COPAP53621 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.41□□□□□ -1.54
COPAP53621 Z95331.1-201ENST00000623075 23112 ntBASIC5.41□□□□□ -1.54
COPAP53621 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
COPAP53621 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COPAP53621 RNU6-304P-201ENST00000364855 107 ntBASIC5.41□□□□□ -1.54
COPAP53621 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 RNY3P9-201ENST00000384727 106 ntBASIC5.41□□□□□ -1.54
COPAP53621 MIR550A3-201ENST00000390735 95 ntBASIC5.41□□□□□ -1.54
COPAP53621 AL109941.1-201ENST00000401925 229 ntBASIC5.41□□□□□ -1.54
COPAP53621 AL645733.1-201ENST00000402250 217 ntBASIC5.41□□□□□ -1.54
COPAP53621 AL133270.1-201ENST00000402635 279 ntBASIC5.41□□□□□ -1.54
COPAP53621 PPIAP9-201ENST00000403866 498 ntBASIC5.41□□□□□ -1.54
COPAP53621 MIR1303-201ENST00000408625 86 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 RPS3AP37-201ENST00000419176 745 ntBASIC5.41□□□□□ -1.54
COPAP53621 OR2X1P-201ENST00000421144 687 ntBASIC5.41□□□□□ -1.54
COPAP53621 RPL7AP49-201ENST00000429522 581 ntBASIC5.41□□□□□ -1.54
COPAP53621 AL591438.1-201ENST00000433508 581 ntBASIC5.41□□□□□ -1.54
COPAP53621 RPS20P1-201ENST00000434853 354 ntBASIC5.41□□□□□ -1.54
COPAP53621 RPL12P46-201ENST00000436610 195 ntBASIC5.41□□□□□ -1.54
COPAP53621 ELOCP10-201ENST00000440624 327 ntBASIC5.41□□□□□ -1.54
COPAP53621 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 HMGB3P6-201ENST00000444896 598 ntBASIC5.41□□□□□ -1.54
COPAP53621 CCDC75P1-201ENST00000469247 791 ntBASIC5.41□□□□□ -1.54
COPAP53621 TRBV8-2-201ENST00000475637 270 ntBASIC5.41□□□□□ -1.54
COPAP53621 AP000797.2-201ENST00000475768 606 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC090114.3-201ENST00000479267 829 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC109462.1-201ENST00000491087 368 ntBASIC5.41□□□□□ -1.54
COPAP53621 MTCYBP35-201ENST00000503630 1137 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC091860.1-201ENST00000505723 432 ntBASIC5.41□□□□□ -1.54
COPAP53621 RPS4XP20-201ENST00000505751 772 ntBASIC5.41□□□□□ -1.54
COPAP53621 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 AC021106.1-201ENST00000509020 1058 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.41□□□□□ -1.54
COPAP53621 AC110775.1-201ENST00000513721 462 ntBASIC5.41□□□□□ -1.54
COPAP53621 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.41□□□□□ -1.54
COPAP53621 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 AP001636.2-201ENST00000525517 696 ntBASIC5.41□□□□□ -1.54
COPAP53621 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.41□□□□□ -1.54
COPAP53621 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.41□□□□□ -1.54
COPAP53621 YWHABP2-201ENST00000540201 713 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COPAP53621 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COPAP53621 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 AP000769.2-201ENST00000602344 396 ntBASIC5.41□□□□□ -1.54
COPAP53621 GAS5-AS1-201ENST00000602767 694 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC009237.13-201ENST00000603193 276 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.41□□□□□ -1.54
COPAP53621 ELOCP34-201ENST00000604436 327 ntBASIC5.41□□□□□ -1.54
COPAP53621 uc_338.9-201ENST00000617424 182 ntBASIC5.41□□□□□ -1.54
COPAP53621 uc_338.7-201ENST00000621834 124 ntBASIC5.41□□□□□ -1.54
COPAP53621 AP002799.1-201ENST00000623552 423 ntBASIC5.41□□□□□ -1.54
COPAP53621 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.41□□□□□ -1.54
COPAP53621 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.41□□□□□ -1.54
COPAP53621 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.41□□□□□ -1.54
COPAP53621 AC090897.3-201ENST00000636973 1157 ntBASIC5.41□□□□□ -1.54
COPAP53621 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COPAP53621 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
COPAP53621 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COPAP53621 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COPAP53621 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.41□□□□□ -1.54
COPAP53621 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.41□□□□□ -1.54
COPAP53621 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPAP53621 CASC19-221ENST00000641309 1382 ntBASIC5.41□□□□□ -1.54
COPAP53621 HSPA8P18-201ENST00000439846 1928 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms