Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.48□□□□□ -1.53
NEK3P51956 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
NEK3P51956 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.48□□□□□ -1.53
NEK3P51956 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NEK3P51956 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NEK3P51956 AC005294.1-201ENST00000355509 281 ntBASIC5.48□□□□□ -1.53
NEK3P51956 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 OR1L6-202ENST00000373684 1044 ntBASIC5.48□□□□□ -1.53
NEK3P51956 RNA5SP339-201ENST00000390987 122 ntBASIC5.48□□□□□ -1.53
NEK3P51956 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 AL512430.2-201ENST00000406786 339 ntBASIC5.48□□□□□ -1.53
NEK3P51956 RN7SKP278-201ENST00000410504 342 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.48□□□□□ -1.53
NEK3P51956 BMS1P13-201ENST00000417301 885 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 SRSF1P1-201ENST00000424058 520 ntBASIC5.48□□□□□ -1.53
NEK3P51956 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.48□□□□□ -1.53
NEK3P51956 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.48□□□□□ -1.53
NEK3P51956 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 MTCO1P3-201ENST00000429327 192 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.48□□□□□ -1.53
NEK3P51956 RPL12P17-201ENST00000432393 498 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.48□□□□□ -1.53
NEK3P51956 RPL19P16-201ENST00000433839 588 ntBASIC5.48□□□□□ -1.53
NEK3P51956 GSTM5P1-201ENST00000434751 660 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AC073052.1-201ENST00000440417 714 ntBASIC5.48□□□□□ -1.53
NEK3P51956 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.48□□□□□ -1.53
NEK3P51956 OTX2P1-201ENST00000450956 354 ntBASIC5.48□□□□□ -1.53
NEK3P51956 OFD1P3Y-201ENST00000453312 783 ntBASIC5.48□□□□□ -1.53
NEK3P51956 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.48□□□□□ -1.53
NEK3P51956 PTGES3P5-201ENST00000455109 434 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 RN7SL172P-201ENST00000460535 303 ntBASIC5.48□□□□□ -1.53
NEK3P51956 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 AC023424.1-201ENST00000496058 459 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AC093720.1-201ENST00000505681 714 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AC006499.3-201ENST00000506077 748 ntBASIC5.48□□□□□ -1.53
NEK3P51956 HIGD1AP14-201ENST00000507617 282 ntBASIC5.48□□□□□ -1.53
NEK3P51956 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 RNA5SP135-201ENST00000517019 125 ntBASIC5.48□□□□□ -1.53
NEK3P51956 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 OR8G3P-201ENST00000533406 921 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.48□□□□□ -1.53
NEK3P51956 PRPF19P1-201ENST00000584766 898 ntBASIC5.48□□□□□ -1.53
NEK3P51956 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.48□□□□□ -1.53
NEK3P51956 AC074101.1-201ENST00000637861 241 ntBASIC5.48□□□□□ -1.53
NEK3P51956 LINC02211-204ENST00000642024 1070 ntBASIC5.48□□□□□ -1.53
NEK3P51956 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NEK3P51956 MAPK10-304ENST00000641341 3984 ntBASIC5.48□□□□□ -1.53
NEK3P51956 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.48□□□□□ -1.53
NEK3P51956 CASC19-206ENST00000641028 1430 ntBASIC5.48□□□□□ -1.53
NEK3P51956 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.47□□□□□ -1.53
NEK3P51956 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
NEK3P51956 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.47□□□□□ -1.53
NEK3P51956 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 AC011155.1-201ENST00000316512 456 ntBASIC5.47□□□□□ -1.53
NEK3P51956 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 SNORA16A-201ENST00000384342 137 ntBASIC5.47□□□□□ -1.53
NEK3P51956 MIR223-201ENST00000385204 110 ntBASIC5.47□□□□□ -1.53
NEK3P51956 GSTA8P-201ENST00000404253 637 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AL133388.1-201ENST00000404509 287 ntBASIC5.47□□□□□ -1.53
NEK3P51956 EIF4A1P3-201ENST00000411521 244 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.47□□□□□ -1.53
NEK3P51956 RPL12P9-201ENST00000412942 488 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AL592310.1-201ENST00000414330 671 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 AL513175.2-201ENST00000422071 443 ntBASIC5.47□□□□□ -1.53
NEK3P51956 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 RAC1P8-201ENST00000427086 527 ntBASIC5.47□□□□□ -1.53
NEK3P51956 HIGD1AP12-201ENST00000427832 281 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.47□□□□□ -1.53
NEK3P51956 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.47□□□□□ -1.53
NEK3P51956 AL627308.1-201ENST00000435693 821 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 RPS11P7-201ENST00000442125 465 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.47□□□□□ -1.53
NEK3P51956 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 AC021660.1-201ENST00000465006 554 ntBASIC5.47□□□□□ -1.53
NEK3P51956 VPS26AP1-201ENST00000483197 979 ntBASIC5.47□□□□□ -1.53
NEK3P51956 RPS21P4-201ENST00000487122 248 ntBASIC5.47□□□□□ -1.53
NEK3P51956 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.47□□□□□ -1.53
NEK3P51956 PGAM1P13-201ENST00000507497 754 ntBASIC5.47□□□□□ -1.53
NEK3P51956 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.47□□□□□ -1.53
NEK3P51956 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.47□□□□□ -1.53
NEK3P51956 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.47□□□□□ -1.53
NEK3P51956 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NEK3P51956 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.47□□□□□ -1.53
NEK3P51956 AC068993.1-201ENST00000546724 589 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms