Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RPL23AP37-201ENST00000479658 549 ntBASIC4.4□□□□□ -1.71
BRCA2P51587 AC012158.1-204ENST00000483430 465 ntBASIC4.4□□□□□ -1.71
BRCA2P51587 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCA2P51587 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCA2P51587 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.4□□□□□ -1.71
BRCA2P51587 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCA2P51587 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCA2P51587 AC006077.1-201ENST00000604746 343 ntBASIC4.4□□□□□ -1.71
BRCA2P51587 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCA2P51587 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
BRCA2P51587 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCA2P51587 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 AL731532.2-201ENST00000623542 1953 ntBASIC4.4□□□□□ -1.71
BRCA2P51587 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCA2P51587 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 AP005435.3-201ENST00000531260 3198 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 SNORA60-201ENST00000362396 134 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.39□□□□□ -1.71
BRCA2P51587 RPL38P1-201ENST00000460914 211 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 RN7SL809P-201ENST00000482040 297 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 AC118465.1-201ENST00000513820 1271 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.39□□□□□ -1.71
BRCA2P51587 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCA2P51587 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCA2P51587 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCA2P51587 AC092641.1-201ENST00000440229 772 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 AC096576.1-201ENST00000489014 359 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 AC006349.1-201ENST00000555526 235 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.39□□□□□ -1.71
BRCA2P51587 QTRT1P1-201ENST00000604344 1078 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 MIR7112-201ENST00000616126 65 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 DDX18P6-201ENST00000450119 1997 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 IL6STP1-201ENST00000346911 1020 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.39□□□□□ -1.71
BRCA2P51587 MIR432-201ENST00000606207 94 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRCA2P51587 AC073073.2-201ENST00000609827 2578 ntBASIC4.39□□□□□ -1.71
BRCA2P51587 MFSD8-242ENST00000641690 4199 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRCA2P51587 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRCA2P51587 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.38□□□□□ -1.71
BRCA2P51587 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BRCA2P51587 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BRCA2P51587 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRCA2P51587 MTND4LP17-201ENST00000414607 293 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 RPL21P23-201ENST00000446654 460 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.38□□□□□ -1.71
BRCA2P51587 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.38□□□□□ -1.71
BRCA2P51587 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.38□□□□□ -1.71
BRCA2P51587 AC009229.4-201ENST00000623854 1947 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
BRCA2P51587 PEX12P1-201ENST00000400284 1048 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.38□□□□□ -1.71
BRCA2P51587 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.38□□□□□ -1.71
BRCA2P51587 RPL23AP12-201ENST00000467573 473 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.38□□□□□ -1.71
BRCA2P51587 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.38□□□□□ -1.71
BRCA2P51587 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.38□□□□□ -1.71
BRCA2P51587 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.38□□□□□ -1.71
BRCA2P51587 AL033523.1-201ENST00000605153 153 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRCA2P51587 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRCA2P51587 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
BRCA2P51587 AC009779.8-201ENST00000641684 4384 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 AC068254.2-201ENST00000623938 3577 ntBASIC4.38□□□□□ -1.71
BRCA2P51587 RNA5SP51-201ENST00000364750 119 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 RNA5SP120-201ENST00000410900 112 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.37□□□□□ -1.71
BRCA2P51587 AGGF1P3-201ENST00000493675 1213 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AC087369.1-201ENST00000520775 996 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 NPM1P47-201ENST00000560843 856 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AC006960.3-201ENST00000561845 705 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.37□□□□□ -1.71
BRCA2P51587 AC125494.3-201ENST00000602759 455 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AC110801.1-201ENST00000623590 212 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AP001642.1-201ENST00000624727 2117 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
BRCA2P51587 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
BRCA2P51587 RNA5SP374-201ENST00000362939 125 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.37□□□□□ -1.71
BRCA2P51587 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.37□□□□□ -1.71
BRCA2P51587 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.37□□□□□ -1.71
BRCA2P51587 DDX39BP2-208ENST00000453923 258 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 AC097462.2-201ENST00000504623 481 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 MIR4433B-201ENST00000581329 102 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms