Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CDH12P3-201ENST00000517935 295 ntBASIC3.91□□□□□ -1.78
SRP9P49458 CDH12P1-201ENST00000518435 295 ntBASIC3.91□□□□□ -1.78
SRP9P49458 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.91□□□□□ -1.78
SRP9P49458 OR5M2P-201ENST00000529003 936 ntBASIC3.91□□□□□ -1.78
SRP9P49458 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.91□□□□□ -1.78
SRP9P49458 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.91□□□□□ -1.78
SRP9P49458 AP006289.1-201ENST00000538089 277 ntBASIC3.91□□□□□ -1.78
SRP9P49458 AC104785.1-201ENST00000603220 588 ntBASIC3.91□□□□□ -1.78
SRP9P49458 AC007390.2-201ENST00000606229 3803 ntBASIC3.91□□□□□ -1.78
SRP9P49458 AL135786.2-201ENST00000608422 615 ntBASIC3.91□□□□□ -1.78
SRP9P49458 uc_338.32-201ENST00000615087 172 ntBASIC3.91□□□□□ -1.78
SRP9P49458 AC074276.2-201ENST00000619891 348 ntBASIC3.91□□□□□ -1.78
SRP9P49458 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SRP9P49458 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SRP9P49458 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SRP9P49458 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.91□□□□□ -1.78
SRP9P49458 IQCB2P-201ENST00000401788 1633 ntBASIC3.91□□□□□ -1.78
SRP9P49458 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SRP9P49458 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SRP9P49458 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
SRP9P49458 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SRP9P49458 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.9□□□□□ -1.78
SRP9P49458 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SRP9P49458 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SRP9P49458 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SRP9P49458 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
SRP9P49458 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.9□□□□□ -1.78
SRP9P49458 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
SRP9P49458 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.9□□□□□ -1.79
SRP9P49458 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRP9P49458 AL133412.1-201ENST00000380194 2992 ntBASIC3.9□□□□□ -1.79
SRP9P49458 MIR192-201ENST00000384915 110 ntBASIC3.9□□□□□ -1.79
SRP9P49458 RPS3AP23-201ENST00000401762 784 ntBASIC3.9□□□□□ -1.79
SRP9P49458 AL049697.2-201ENST00000403708 294 ntBASIC3.9□□□□□ -1.79
SRP9P49458 FCF1P5-201ENST00000406490 482 ntBASIC3.9□□□□□ -1.79
SRP9P49458 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SRP9P49458 RNA5SP239-201ENST00000410218 129 ntBASIC3.9□□□□□ -1.79
SRP9P49458 AC019050.1-201ENST00000418508 492 ntBASIC3.9□□□□□ -1.79
SRP9P49458 AC099336.2-201ENST00000422457 254 ntBASIC3.9□□□□□ -1.79
SRP9P49458 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
SRP9P49458 ELOCP18-201ENST00000434209 337 ntBASIC3.9□□□□□ -1.79
SRP9P49458 AL138878.2-201ENST00000440581 1241 ntBASIC3.9□□□□□ -1.79
SRP9P49458 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.9□□□□□ -1.79
SRP9P49458 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.9□□□□□ -1.79
SRP9P49458 AC099560.2-201ENST00000457554 255 ntBASIC3.9□□□□□ -1.79
SRP9P49458 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.9□□□□□ -1.79
SRP9P49458 AC092045.1-201ENST00000495716 1231 ntBASIC3.9□□□□□ -1.79
SRP9P49458 AC139783.2-201ENST00000504847 1145 ntBASIC3.9□□□□□ -1.79
SRP9P49458 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.9□□□□□ -1.79
SRP9P49458 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
SRP9P49458 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.9□□□□□ -1.79
SRP9P49458 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.9□□□□□ -1.79
SRP9P49458 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.9□□□□□ -1.79
SRP9P49458 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.9□□□□□ -1.79
SRP9P49458 AC069061.3-201ENST00000582254 823 ntBASIC3.9□□□□□ -1.79
SRP9P49458 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.9□□□□□ -1.79
SRP9P49458 AL133243.1-201ENST00000614487 366 ntBASIC3.9□□□□□ -1.79
SRP9P49458 AP005019.3-201ENST00000620418 560 ntBASIC3.9□□□□□ -1.79
SRP9P49458 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.9□□□□□ -1.79
SRP9P49458 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.9□□□□□ -1.79
SRP9P49458 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SRP9P49458 LINC01808-202ENST00000641680 1116 ntBASIC3.9□□□□□ -1.79
SRP9P49458 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRP9P49458 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.9□□□□□ -1.79
SRP9P49458 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRP9P49458 AC007529.1-201ENST00000418574 2178 ntBASIC3.9□□□□□ -1.79
SRP9P49458 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRP9P49458 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SRP9P49458 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.89□□□□□ -1.79
SRP9P49458 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 AC105074.1-201ENST00000623380 3095 ntBASIC3.89□□□□□ -1.79
SRP9P49458 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 NXPH1-205ENST00000602349 1953 ntBASIC3.89□□□□□ -1.79
SRP9P49458 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.89□□□□□ -1.79
SRP9P49458 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 AC079741.1-201ENST00000321498 212 ntBASIC3.89□□□□□ -1.79
SRP9P49458 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 SNORD113.2-201ENST00000364166 89 ntBASIC3.89□□□□□ -1.79
SRP9P49458 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 MIR585-201ENST00000384887 94 ntBASIC3.89□□□□□ -1.79
SRP9P49458 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.89□□□□□ -1.79
SRP9P49458 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.89□□□□□ -1.79
SRP9P49458 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.89□□□□□ -1.79
SRP9P49458 AC013268.2-201ENST00000420753 337 ntBASIC3.89□□□□□ -1.79
SRP9P49458 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.89□□□□□ -1.79
SRP9P49458 AL391219.1-201ENST00000422570 483 ntBASIC3.89□□□□□ -1.79
SRP9P49458 RPS12P10-201ENST00000427031 377 ntBASIC3.89□□□□□ -1.79
SRP9P49458 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.89□□□□□ -1.79
SRP9P49458 EXTL2P1-201ENST00000446218 416 ntBASIC3.89□□□□□ -1.79
SRP9P49458 ARL2BPP10-201ENST00000446487 531 ntBASIC3.89□□□□□ -1.79
SRP9P49458 SEPT14P1-201ENST00000458703 648 ntBASIC3.89□□□□□ -1.79
SRP9P49458 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.89□□□□□ -1.79
SRP9P49458 RN7SL354P-201ENST00000469282 294 ntBASIC3.89□□□□□ -1.79
SRP9P49458 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.89□□□□□ -1.79
SRP9P49458 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.89□□□□□ -1.79
SRP9P49458 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms