Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC091860.1-201ENST00000505723 432 ntBASIC4.79□□□□□ -1.64
CENPAP49450 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.79□□□□□ -1.64
CENPAP49450 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.79□□□□□ -1.64
CENPAP49450 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.79□□□□□ -1.64
CENPAP49450 SNORD46.2-201ENST00000516021 102 ntBASIC4.79□□□□□ -1.64
CENPAP49450 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.79□□□□□ -1.64
CENPAP49450 AC027369.5-201ENST00000533838 755 ntBASIC4.79□□□□□ -1.64
CENPAP49450 AP004607.2-201ENST00000533949 322 ntBASIC4.79□□□□□ -1.64
CENPAP49450 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.79□□□□□ -1.64
CENPAP49450 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.79□□□□□ -1.64
CENPAP49450 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.79□□□□□ -1.64
CENPAP49450 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.79□□□□□ -1.64
CENPAP49450 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.79□□□□□ -1.64
CENPAP49450 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.79□□□□□ -1.64
CENPAP49450 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CENPAP49450 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.79□□□□□ -1.64
CENPAP49450 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.79□□□□□ -1.64
CENPAP49450 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.79□□□□□ -1.64
CENPAP49450 MIR4505-201ENST00000582238 73 ntBASIC4.79□□□□□ -1.64
CENPAP49450 AC108865.2-201ENST00000606881 432 ntBASIC4.79□□□□□ -1.64
CENPAP49450 U6.48-201ENST00000618523 106 ntBASIC4.79□□□□□ -1.64
CENPAP49450 MIR6839-201ENST00000620425 113 ntBASIC4.79□□□□□ -1.64
CENPAP49450 AP006248.2-201ENST00000623309 592 ntBASIC4.79□□□□□ -1.64
CENPAP49450 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.79□□□□□ -1.64
CENPAP49450 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.79□□□□□ -1.64
CENPAP49450 AC090897.3-201ENST00000636973 1157 ntBASIC4.79□□□□□ -1.64
CENPAP49450 ZNF663P-202ENST00000641770 1131 ntBASIC4.79□□□□□ -1.64
CENPAP49450 SAMMSON-227ENST00000642114 1199 ntBASIC4.79□□□□□ -1.64
CENPAP49450 AC073136.1-201ENST00000449426 2884 ntBASIC4.79□□□□□ -1.64
CENPAP49450 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.79□□□□□ -1.64
CENPAP49450 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CENPAP49450 AL133412.1-201ENST00000380194 2992 ntBASIC4.79□□□□□ -1.64
CENPAP49450 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CENPAP49450 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.79□□□□□ -1.64
CENPAP49450 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.79□□□□□ -1.64
CENPAP49450 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.79□□□□□ -1.64
CENPAP49450 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CENPAP49450 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.78□□□□□ -1.64
CENPAP49450 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CENPAP49450 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.78□□□□□ -1.64
CENPAP49450 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CENPAP49450 RNU6-1339P-201ENST00000363574 91 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 Y_RNA.472-201ENST00000384322 102 ntBASIC4.78□□□□□ -1.64
CENPAP49450 RNU6-636P-201ENST00000384598 107 ntBASIC4.78□□□□□ -1.64
CENPAP49450 MIR513B-201ENST00000385136 84 ntBASIC4.78□□□□□ -1.64
CENPAP49450 RPL21P67-201ENST00000402896 478 ntBASIC4.78□□□□□ -1.64
CENPAP49450 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.78□□□□□ -1.64
CENPAP49450 AC007738.1-201ENST00000413892 348 ntBASIC4.78□□□□□ -1.64
CENPAP49450 GTF2IP5-201ENST00000414608 731 ntBASIC4.78□□□□□ -1.64
CENPAP49450 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 AC093155.2-201ENST00000420734 937 ntBASIC4.78□□□□□ -1.64
CENPAP49450 C1DP1-201ENST00000426049 402 ntBASIC4.78□□□□□ -1.64
CENPAP49450 HIGD1AP12-201ENST00000427832 281 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC002069.1-201ENST00000429649 1159 ntBASIC4.78□□□□□ -1.64
CENPAP49450 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 AL161722.2-201ENST00000434731 981 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC019185.1-201ENST00000442718 389 ntBASIC4.78□□□□□ -1.64
CENPAP49450 MTCYBP42-201ENST00000444653 1130 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 GAPDHP25-201ENST00000447061 1001 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AL589880.1-201ENST00000448271 287 ntBASIC4.78□□□□□ -1.64
CENPAP49450 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 MYO5BP2-201ENST00000449815 1277 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.78□□□□□ -1.64
CENPAP49450 DNAJC19P8-201ENST00000452887 259 ntBASIC4.78□□□□□ -1.64
CENPAP49450 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 OR2AF1P-201ENST00000454899 889 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC026348.1-201ENST00000462549 1053 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC091959.2-201ENST00000477363 321 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC069528.1-202ENST00000482888 637 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC010627.1-201ENST00000503819 1294 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 MTND2P38-201ENST00000522536 667 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.78□□□□□ -1.64
CENPAP49450 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.78□□□□□ -1.64
CENPAP49450 DEFB130C-202ENST00000530001 230 ntBASIC4.78□□□□□ -1.64
CENPAP49450 NANOGNBP2-201ENST00000544753 553 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.78□□□□□ -1.64
CENPAP49450 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CENPAP49450 AC084757.1-201ENST00000559987 490 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 ELOCP28-201ENST00000590044 317 ntBASIC4.78□□□□□ -1.64
CENPAP49450 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.78□□□□□ -1.64
CENPAP49450 AP001542.2-201ENST00000593141 364 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.78□□□□□ -1.64
CENPAP49450 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.78□□□□□ -1.64
CENPAP49450 ELOCP35-201ENST00000604289 336 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AC005252.1-201ENST00000604518 1063 ntBASIC4.78□□□□□ -1.64
CENPAP49450 AL158196.1-201ENST00000616786 434 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms