Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 AL163642.2-201ENST00000604722 1019 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC096553.1-201ENST00000605169 829 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC005840.5-201ENST00000619166 599 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX2P48431 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 AL359757.1-201ENST00000623176 255 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC138965.3-201ENST00000623875 498 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC073530.2-201ENST00000623987 261 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AL683826.1-201ENST00000624104 627 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC015726.3-201ENST00000624501 418 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SOX2P48431 AC011755.1-201ENST00000623763 2049 ntBASIC4.71□□□□□ -1.66
SOX2P48431 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 IFIT1P1-201ENST00000400497 1449 ntBASIC4.71□□□□□ -1.66
SOX2P48431 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX2P48431 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.7□□□□□ -1.66
SOX2P48431 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 AL445523.1-201ENST00000451184 1362 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC025263.3-201ENST00000622965 1396 ntBASIC4.7□□□□□ -1.66
SOX2P48431 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 OR9G4-201ENST00000302957 984 ntBASIC4.7□□□□□ -1.66
SOX2P48431 RN7SKP6-201ENST00000364795 319 ntBASIC4.7□□□□□ -1.66
SOX2P48431 RNA5SP131-201ENST00000365452 119 ntBASIC4.7□□□□□ -1.66
SOX2P48431 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 SUGT1P2-201ENST00000379452 992 ntBASIC4.7□□□□□ -1.66
SOX2P48431 SNORD65.1-201ENST00000390889 71 ntBASIC4.7□□□□□ -1.66
SOX2P48431 OR7E156P-201ENST00000400303 464 ntBASIC4.7□□□□□ -1.66
SOX2P48431 HMGB1P20-201ENST00000402555 677 ntBASIC4.7□□□□□ -1.66
SOX2P48431 GSTA8P-201ENST00000404253 637 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC245060.4-201ENST00000413293 1121 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 COX5BP7-201ENST00000414780 274 ntBASIC4.7□□□□□ -1.66
SOX2P48431 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.7□□□□□ -1.66
SOX2P48431 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 OR6D1P-201ENST00000436165 939 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 TPTE2P6-202ENST00000445572 1007 ntBASIC4.7□□□□□ -1.66
SOX2P48431 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 AC092754.2-201ENST00000463506 460 ntBASIC4.7□□□□□ -1.66
SOX2P48431 SYPL1P1-201ENST00000473622 768 ntBASIC4.7□□□□□ -1.66
SOX2P48431 RPL7P18-201ENST00000478965 734 ntBASIC4.7□□□□□ -1.66
SOX2P48431 RPL5P22-201ENST00000480199 884 ntBASIC4.7□□□□□ -1.66
SOX2P48431 RN7SL273P-201ENST00000481561 299 ntBASIC4.7□□□□□ -1.66
SOX2P48431 EIF3LP3-201ENST00000495197 822 ntBASIC4.7□□□□□ -1.66
SOX2P48431 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 ENPP7P11-201ENST00000505915 627 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC104090.1-201ENST00000506341 1171 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC021146.8-201ENST00000507455 733 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 AC109445.1-201ENST00000512356 383 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC105185.1-201ENST00000518705 535 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.7□□□□□ -1.66
SOX2P48431 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 AC018552.1-201ENST00000562099 811 ntBASIC4.7□□□□□ -1.66
SOX2P48431 MTCYBP28-201ENST00000566728 1132 ntBASIC4.7□□□□□ -1.66
SOX2P48431 MRPS21P7-201ENST00000566937 238 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SOX2P48431 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.7□□□□□ -1.66
SOX2P48431 AC009220.3-201ENST00000604318 586 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC122133.1-201ENST00000613964 233 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC023158.2-201ENST00000614876 543 ntBASIC4.7□□□□□ -1.66
SOX2P48431 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX2P48431 AC016717.3-201ENST00000624730 554 ntBASIC4.7□□□□□ -1.66
SOX2P48431 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SOX2P48431 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SOX2P48431 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SOX2P48431 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.7□□□□□ -1.66
SOX2P48431 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.7□□□□□ -1.66
SOX2P48431 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.7□□□□□ -1.66
SOX2P48431 SOCS5P3-201ENST00000425115 1576 ntBASIC4.7□□□□□ -1.66
SOX2P48431 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX2P48431 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms