Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC006116.3-201ENST00000592968 361 ntBASIC5.04□□□□□ -1.6
HADHAP40939 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 AC087763.1-201ENST00000603391 286 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AC005156.1-201ENST00000613371 573 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 AC078880.5-201ENST00000617845 421 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AC024595.1-201ENST00000623088 387 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.04□□□□□ -1.6
HADHAP40939 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 DHX9P1-201ENST00000436565 3076 ntBASIC5.04□□□□□ -1.6
HADHAP40939 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 AC073429.2-201ENST00000569694 1444 ntBASIC5.04□□□□□ -1.6
HADHAP40939 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.04□□□□□ -1.6
HADHAP40939 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HADHAP40939 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.04□□□□□ -1.6
HADHAP40939 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.04□□□□□ -1.6
HADHAP40939 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 AC022031.1-201ENST00000585985 2593 ntBASIC5.04□□□□□ -1.6
HADHAP40939 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HADHAP40939 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.03□□□□□ -1.6
HADHAP40939 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.03□□□□□ -1.6
HADHAP40939 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HADHAP40939 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HADHAP40939 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HADHAP40939 OR5AW1P-201ENST00000426334 1006 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC092447.2-201ENST00000435487 669 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.03□□□□□ -1.6
HADHAP40939 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.03□□□□□ -1.6
HADHAP40939 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.03□□□□□ -1.6
HADHAP40939 AC073850.1-201ENST00000449243 255 ntBASIC5.03□□□□□ -1.6
HADHAP40939 MTND2P8-201ENST00000450555 1025 ntBASIC5.03□□□□□ -1.6
HADHAP40939 RNA5SP103-201ENST00000459503 118 ntBASIC5.03□□□□□ -1.6
HADHAP40939 RN7SL517P-201ENST00000462240 305 ntBASIC5.03□□□□□ -1.6
HADHAP40939 RN7SL826P-201ENST00000479724 288 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC090686.1-201ENST00000481577 749 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.03□□□□□ -1.6
HADHAP40939 AC073358.1-201ENST00000505671 684 ntBASIC5.03□□□□□ -1.6
HADHAP40939 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.03□□□□□ -1.6
HADHAP40939 AP000676.2-201ENST00000529711 301 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.03□□□□□ -1.6
HADHAP40939 OR11J2P-201ENST00000555298 907 ntBASIC5.03□□□□□ -1.6
HADHAP40939 GLRXP2-201ENST00000555594 321 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC084757.1-201ENST00000559987 490 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.03□□□□□ -1.6
HADHAP40939 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.03□□□□□ -1.6
HADHAP40939 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.03□□□□□ -1.6
HADHAP40939 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.03□□□□□ -1.6
HADHAP40939 ATP5F1P7-201ENST00000567330 760 ntBASIC5.03□□□□□ -1.6
HADHAP40939 MIR4646-201ENST00000580775 63 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC012254.4-201ENST00000588843 273 ntBASIC5.03□□□□□ -1.6
HADHAP40939 BNIP3P31-201ENST00000604515 566 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC087783.2-201ENST00000605070 562 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AL355816.1-201ENST00000607951 118 ntBASIC5.03□□□□□ -1.6
HADHAP40939 MIR8069-1-201ENST00000616627 86 ntBASIC5.03□□□□□ -1.6
HADHAP40939 MIR8069-2-201ENST00000621412 86 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AC116563.2-201ENST00000624751 535 ntBASIC5.03□□□□□ -1.6
HADHAP40939 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.03□□□□□ -1.6
HADHAP40939 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.03□□□□□ -1.6
HADHAP40939 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
HADHAP40939 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HADHAP40939 AL592437.2-201ENST00000421655 2434 ntBASIC5.03□□□□□ -1.6
HADHAP40939 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HADHAP40939 AC083899.2-201ENST00000423285 1376 ntBASIC5.03□□□□□ -1.6
HADHAP40939 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.03□□□□□ -1.6
HADHAP40939 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
HADHAP40939 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HADHAP40939 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HADHAP40939 AC100871.1-201ENST00000507871 1456 ntBASIC5.02□□□□□ -1.61
HADHAP40939 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HADHAP40939 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HADHAP40939 AC107068.1-201ENST00000563286 4218 ntBASIC5.02□□□□□ -1.61
HADHAP40939 SNORA73.1-201ENST00000363107 205 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AL645733.1-201ENST00000402250 217 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AL359643.1-201ENST00000404109 423 ntBASIC5.02□□□□□ -1.61
HADHAP40939 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AC073069.1-201ENST00000428657 441 ntBASIC5.02□□□□□ -1.61
HADHAP40939 RPL34P6-201ENST00000432390 345 ntBASIC5.02□□□□□ -1.61
HADHAP40939 BX323845.1-201ENST00000432417 179 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AL450023.3-201ENST00000440592 271 ntBASIC5.02□□□□□ -1.61
HADHAP40939 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HADHAP40939 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.02□□□□□ -1.61
HADHAP40939 CYCSP34-201ENST00000458172 304 ntBASIC5.02□□□□□ -1.61
HADHAP40939 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.02□□□□□ -1.61
HADHAP40939 NIP7P2-201ENST00000485801 544 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AC020890.1-201ENST00000491837 504 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.02□□□□□ -1.61
HADHAP40939 RN7SKP66-201ENST00000516681 231 ntBASIC5.02□□□□□ -1.61
HADHAP40939 Y_RNA.719-201ENST00000517156 106 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.02□□□□□ -1.61
HADHAP40939 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.02□□□□□ -1.61
HADHAP40939 NPM1P6-201ENST00000521088 871 ntBASIC5.02□□□□□ -1.61
HADHAP40939 PDCD5P1-201ENST00000543528 309 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms