Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-1005P-201ENST00000384519 107 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AP002784.2-201ENST00000397300 549 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD13P35453 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXD13P35453 AL158073.1-201ENST00000426848 1104 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 LYPLA1P1-201ENST00000434514 622 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXD13P35453 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXD13P35453 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXD13P35453 OR1H1P-201ENST00000448731 937 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC091685.2-201ENST00000454924 864 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 RPL32P14-201ENST00000463196 378 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC008379.1-201ENST00000463655 464 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXD13P35453 RN7SL346P-201ENST00000491561 294 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 TPT1P3-201ENST00000492841 512 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 RNU2-30P-201ENST00000516209 141 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 RNU6-334P-201ENST00000517072 102 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXD13P35453 SOX5P1-201ENST00000524155 1127 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXD13P35453 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD13P35453 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD13P35453 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXD13P35453 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXD13P35453 OR2BH1P-201ENST00000608850 864 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC112503.2-201ENST00000609005 552 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC018926.1-201ENST00000616335 435 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 MIR6853-201ENST00000619642 74 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC095038.2-201ENST00000621464 1070 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AP000943.4-201ENST00000622912 357 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AL359757.1-201ENST00000623176 255 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC091953.3-201ENST00000623220 236 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 AC132825.7-201ENST00000638744 335 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD13P35453 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
HOXD13P35453 AC090971.4-201ENST00000560291 1800 ntBASIC5.16□□□□□ -1.58
HOXD13P35453 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD13P35453 VN2R3P-201ENST00000422626 1412 ntBASIC5.15□□□□□ -1.58
HOXD13P35453 SEC63P2-201ENST00000503863 1939 ntBASIC5.15□□□□□ -1.58
HOXD13P35453 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.58
HOXD13P35453 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXD13P35453 HSPA8P19-201ENST00000505359 1517 ntBASIC5.15□□□□□ -1.58
HOXD13P35453 SNORD56.4-201ENST00000363883 71 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 RNU6-146P-201ENST00000384602 108 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD13P35453 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD13P35453 AL360081.1-201ENST00000428299 555 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 BRWD1P3-201ENST00000428816 390 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 FABP7P2-201ENST00000429946 379 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD13P35453 RPL12P46-201ENST00000436610 195 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AC104651.2-201ENST00000447549 528 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 MTND2P8-201ENST00000450555 1025 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AL935212.3-201ENST00000450729 284 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AL445433.1-201ENST00000457507 257 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AP000942.1-201ENST00000463969 747 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 CCDC75P1-201ENST00000469247 791 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 CYCSP20-201ENST00000473154 315 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 OR5H3P-201ENST00000502817 919 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HOXD13P35453 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXD13P35453 OR5M2P-201ENST00000529003 936 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 OR5D15P-201ENST00000531671 942 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXD13P35453 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXD13P35453 AL110118.1-201ENST00000553543 400 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 EDDM3DP-201ENST00000554692 434 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AL121594.4-201ENST00000556211 1196 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD13P35453 AC005084.1-201ENST00000605160 304 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 AC026741.1-201ENST00000605892 482 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD13P35453 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXD13P35453 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD13P35453 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD13P35453 AL359922.3-201ENST00000624779 1670 ntBASIC5.15□□□□□ -1.59
HOXD13P35453 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD13P35453 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD13P35453 RNA5SP27-201ENST00000363839 119 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD13P35453 RNU6-98P-201ENST00000384173 107 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HOXD13P35453 AL080315.1-201ENST00000406055 466 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AL512430.2-201ENST00000406786 339 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AL591848.1-201ENST00000413092 322 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 BX510359.2-201ENST00000417920 305 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC140479.3-201ENST00000418944 1126 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 EIF4A1P1-201ENST00000420241 934 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD13P35453 AC073310.1-201ENST00000423226 1033 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD13P35453 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD13P35453 AL512637.2-201ENST00000431287 1256 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 RPS20P1-201ENST00000434853 354 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD13P35453 ARL5AP2-201ENST00000444698 533 ntBASIC5.14□□□□□ -1.59
HOXD13P35453 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD13P35453 AC239809.1-201ENST00000450470 217 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms