Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP1P30622 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 AC092162.3-201ENST00000624511 1624 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP1P30622 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP1P30622 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP1P30622 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP1P30622 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.61□□□□□ -1.35
CLIP1P30622 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP1P30622 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP1P30622 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.61□□□□□ -1.35
CLIP1P30622 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP1P30622 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.61□□□□□ -1.35
CLIP1P30622 RPL7P2-201ENST00000427639 268 ntBASIC6.61□□□□□ -1.35
CLIP1P30622 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.61□□□□□ -1.35
CLIP1P30622 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.61□□□□□ -1.35
CLIP1P30622 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.61□□□□□ -1.35
CLIP1P30622 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP1P30622 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP1P30622 AC026979.4-201ENST00000606555 645 ntBASIC6.61□□□□□ -1.35
CLIP1P30622 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.61□□□□□ -1.35
CLIP1P30622 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP1P30622 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP1P30622 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP1P30622 ERCC6-202ENST00000374127 1782 ntBASIC6.61□□□□□ -1.35
CLIP1P30622 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP1P30622 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.6□□□□□ -1.35
CLIP1P30622 AL022322.2-201ENST00000624072 20397 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 SNORA62.3-201ENST00000365110 153 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 VN1R8P-201ENST00000407739 893 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 LINC01881-201ENST00000416103 412 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.6□□□□□ -1.35
CLIP1P30622 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.6□□□□□ -1.35
CLIP1P30622 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.6□□□□□ -1.35
CLIP1P30622 AL133372.1-201ENST00000493565 745 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 IGLV3-26-201ENST00000520756 302 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC6.6□□□□□ -1.35
CLIP1P30622 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.6□□□□□ -1.35
CLIP1P30622 AL451086.1-201ENST00000605596 223 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP1P30622 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
CLIP1P30622 USP9YP4-201ENST00000424401 1745 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.6□□□□□ -1.35
CLIP1P30622 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CLIP1P30622 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP1P30622 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.6□□□□□ -1.35
CLIP1P30622 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP1P30622 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP1P30622 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CLIP1P30622 TRAV35-201ENST00000390462 330 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 AP000357.1-201ENST00000409926 1165 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 AC073335.1-201ENST00000427776 363 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP1P30622 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP1P30622 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP1P30622 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.59□□□□□ -1.35
CLIP1P30622 NPM1P41-201ENST00000512920 831 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 MTND4LP31-201ENST00000514859 294 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 MIR4444-1-201ENST00000581696 74 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 MIR4444-2-201ENST00000584390 74 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP1P30622 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CLIP1P30622 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP1P30622 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP1P30622 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP1P30622 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP1P30622 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CLIP1P30622 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP1P30622 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP1P30622 AC010266.2-201ENST00000564741 3255 ntBASIC6.59□□□□□ -1.35
CLIP1P30622 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CLIP1P30622 RNA5SP44-201ENST00000410446 133 ntBASIC6.59□□□□□ -1.36
CLIP1P30622 HSPE1P12-201ENST00000412576 301 ntBASIC6.59□□□□□ -1.36
CLIP1P30622 RPS23P10-201ENST00000416185 486 ntBASIC6.59□□□□□ -1.36
CLIP1P30622 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CLIP1P30622 RAD23BP3-201ENST00000454157 1152 ntBASIC6.59□□□□□ -1.36
CLIP1P30622 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.59□□□□□ -1.36
CLIP1P30622 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.59□□□□□ -1.36
CLIP1P30622 AC039056.2-201ENST00000622261 511 ntBASIC6.59□□□□□ -1.36
CLIP1P30622 AC138907.10-201ENST00000623708 983 ntBASIC6.59□□□□□ -1.36
CLIP1P30622 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP1P30622 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP1P30622 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CLIP1P30622 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CLIP1P30622 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CLIP1P30622 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP1P30622 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP1P30622 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP1P30622 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CLIP1P30622 ATP5F1P3-201ENST00000397213 657 ntBASIC6.58□□□□□ -1.36
CLIP1P30622 RNU6ATAC-201ENST00000408749 126 ntBASIC6.58□□□□□ -1.36
CLIP1P30622 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP1P30622 HMGB3P5-201ENST00000428894 612 ntBASIC6.58□□□□□ -1.36
CLIP1P30622 TBCAP1-201ENST00000436520 327 ntBASIC6.58□□□□□ -1.36
CLIP1P30622 AC005008.1-201ENST00000456151 612 ntBASIC6.58□□□□□ -1.36
CLIP1P30622 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP1P30622 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP1P30622 AC053481.3-201ENST00000577881 843 ntBASIC6.58□□□□□ -1.36
CLIP1P30622 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP1P30622 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms