Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PCNPP1-201ENST00000552501 511 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN3P26045 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.8□□□□□ -1.64
PTPN3P26045 AC105129.1-201ENST00000560250 297 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN3P26045 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.8□□□□□ -1.64
PTPN3P26045 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN3P26045 AP005262.1-201ENST00000582646 997 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN3P26045 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.8□□□□□ -1.64
PTPN3P26045 AC079880.2-201ENST00000603790 1213 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN3P26045 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN3P26045 AC010435.1-201ENST00000623353 1177 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN3P26045 AP001642.1-201ENST00000624727 2117 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN3P26045 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN3P26045 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN3P26045 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN3P26045 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN3P26045 AL136164.3-201ENST00000624429 3978 ntBASIC4.8□□□□□ -1.64
PTPN3P26045 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN3P26045 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTPN3P26045 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PTPN3P26045 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN3P26045 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN3P26045 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PTPN3P26045 RNU6-252P-201ENST00000363232 107 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PTPN3P26045 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 HMGB1P13-201ENST00000406019 642 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN3P26045 AL591848.1-201ENST00000413092 322 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 AC019050.1-201ENST00000418508 492 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN3P26045 AL606495.1-201ENST00000422100 813 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 RPS6P14-201ENST00000425165 719 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 FO393419.3-201ENST00000428741 282 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN3P26045 VN1R54P-201ENST00000435210 1049 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 MED6P1-201ENST00000439659 713 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN3P26045 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN3P26045 RN7SL610P-201ENST00000463845 291 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 RPL5P22-201ENST00000480199 884 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 AC025164.1-201ENST00000496249 478 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 NDUFB5P1-201ENST00000508134 564 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
PTPN3P26045 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN3P26045 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN3P26045 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN3P26045 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN3P26045 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN3P26045 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 AC015912.2-201ENST00000571053 181 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 DNAJC19P3-201ENST00000594491 331 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 AC005084.1-201ENST00000605160 304 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN3P26045 AL021707.7-201ENST00000607991 416 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 AC243654.2-201ENST00000612843 443 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN3P26045 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN3P26045 AC106858.1-201ENST00000637497 429 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 ASNSP1-201ENST00000518311 1939 ntBASIC4.79□□□□□ -1.64
PTPN3P26045 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
PTPN3P26045 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN3P26045 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN3P26045 AL672167.1-203ENST00000641299 2975 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN3P26045 AL592494.2-201ENST00000425455 1548 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PTPN3P26045 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN3P26045 IGKV7-3-201ENST00000357453 298 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 RNU6-317P-201ENST00000384031 107 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 ATP5F1P6-201ENST00000402768 767 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 RN7SKP100-201ENST00000411258 284 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 XKRYP4-201ENST00000414395 483 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN3P26045 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN3P26045 FABP7P1-201ENST00000424004 391 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 RPL12P34-201ENST00000424532 479 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 AL450263.2-201ENST00000439400 589 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 CBX1P4-201ENST00000439415 457 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 AC073648.4-201ENST00000442655 781 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 RNFT1P2-201ENST00000443064 757 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 AC092685.1-201ENST00000447960 1243 ntBASIC4.78□□□□□ -1.64
PTPN3P26045 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN3P26045 XKRYP5-201ENST00000449659 483 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms