Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGA1P17096 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HMGA1P17096 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGA1P17096 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGA1P17096 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HMGA1P17096 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 RN7SKP97-201ENST00000410966 333 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 HSPE1P12-201ENST00000412576 301 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 SEPT7P8-201ENST00000413308 775 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HMGA1P17096 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGA1P17096 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGA1P17096 RPL38P1-201ENST00000460914 211 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 RPL7P1-201ENST00000468161 747 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 RPL7P9-201ENST00000468715 747 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 BTG4P1-201ENST00000510421 183 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGA1P17096 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGA1P17096 AC068993.1-201ENST00000546724 589 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGA1P17096 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGA1P17096 BNIP3P41-202ENST00000616656 861 ntBASIC4.31□□□□□ -1.72
HMGA1P17096 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
HMGA1P17096 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGA1P17096 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGA1P17096 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
HMGA1P17096 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGA1P17096 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMGA1P17096 AL050305.1-201ENST00000399993 1230 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA1P17096 AC004448.2-201ENST00000422360 586 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGA1P17096 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.3□□□□□ -1.72
HMGA1P17096 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGA1P17096 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA1P17096 AC079804.1-201ENST00000461922 436 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGA1P17096 RPL23AP2-201ENST00000471227 466 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGA1P17096 DEFB109F-201ENST00000491870 277 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 AC010460.1-201ENST00000507087 466 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HMGA1P17096 KRT19P6-201ENST00000510983 209 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGA1P17096 AC063950.1-201ENST00000552036 308 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMGA1P17096 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMGA1P17096 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGA1P17096 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
HMGA1P17096 MAPK10-320ENST00000641462 6696 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
HMGA1P17096 ASNSP1-204ENST00000641977 1664 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HMGA1P17096 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA1P17096 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.29□□□□□ -1.72
HMGA1P17096 RNU1-15P-201ENST00000353977 144 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HMGA1P17096 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA1P17096 RNU4-6P-201ENST00000410804 122 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGA1P17096 AC073335.1-201ENST00000427776 363 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 SKP1P3-201ENST00000429280 487 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 KATNBL1P2-201ENST00000433311 835 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGA1P17096 FCF1P7-201ENST00000451185 558 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGA1P17096 SAP18P1-201ENST00000512058 390 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGA1P17096 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA1P17096 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGA1P17096 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGA1P17096 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGA1P17096 MIR5684-201ENST00000585074 65 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA1P17096 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.29□□□□□ -1.72
HMGA1P17096 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HMGA1P17096 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA1P17096 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HMGA1P17096 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGA1P17096 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA1P17096 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGA1P17096 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGA1P17096 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGA1P17096 AC092162.3-201ENST00000624511 1624 ntBASIC4.28□□□□□ -1.72
HMGA1P17096 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGA1P17096 AL122126.1-201ENST00000546905 1318 ntBASIC4.28□□□□□ -1.72
HMGA1P17096 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
HMGA1P17096 AC067945.1-201ENST00000342609 618 ntBASIC4.28□□□□□ -1.72
HMGA1P17096 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HMGA1P17096 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms