Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC010975.2-201ENST00000427781 588 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 SKP1P3-201ENST00000429280 487 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 CYCSP11-201ENST00000436426 315 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 RPL12P18-201ENST00000437175 325 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 PCBP2P1-201ENST00000437262 977 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 OR6C5P-201ENST00000452388 923 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 RN7SL197P-201ENST00000466981 299 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 RN7SL269P-201ENST00000467795 305 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 RPL7P38-201ENST00000488396 739 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC105384.2-201ENST00000508433 640 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC048346.1-201ENST00000510247 144 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 HMGB1P23-201ENST00000518743 568 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.77□□□□□ -1.49
COL6A2P12110 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.77□□□□□ -1.49
COL6A2P12110 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL6A2P12110 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 AC090186.1-201ENST00000605991 572 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC092681.3-201ENST00000609463 678 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC008498.1-201ENST00000613012 531 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 FAM27E2-201ENST00000619668 403 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.77□□□□□ -1.49
COL6A2P12110 AC074140.1-201ENST00000621617 208 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 DBF4P1-201ENST00000412976 1892 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL6A2P12110 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.76□□□□□ -1.49
COL6A2P12110 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
COL6A2P12110 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 BCORP1-203ENST00000513194 5093 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL6A2P12110 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 OR52E6-202ENST00000379946 954 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 SNORA5.1-201ENST00000384275 131 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL6A2P12110 RN7SKP33-201ENST00000410942 340 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC068533.2-201ENST00000411872 306 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.76□□□□□ -1.49
COL6A2P12110 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 RPS7P13-201ENST00000413955 498 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 UBTFL3-201ENST00000418934 1024 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 OR10T1P-201ENST00000424327 947 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 NPM1P22-201ENST00000427761 952 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 MRPS10P2-201ENST00000431226 381 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 TMX2P1-201ENST00000436507 708 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC023141.3-201ENST00000436698 278 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AL512286.1-201ENST00000439244 400 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 UBE2V1P5-201ENST00000440070 405 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 RPL5P25-201ENST00000441148 775 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 RPS7P5-201ENST00000441482 581 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.76□□□□□ -1.49
COL6A2P12110 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 RPS23P9-201ENST00000448848 438 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.76□□□□□ -1.49
COL6A2P12110 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 MEMO1P4-201ENST00000453590 386 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 SNORD125-201ENST00000459538 96 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.76□□□□□ -1.49
COL6A2P12110 RN7SL168P-201ENST00000463821 279 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 UBTFL6-201ENST00000477929 1024 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 RN7SL362P-201ENST00000494228 267 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 AC122718.2-201ENST00000505325 591 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 RN7SKP183-201ENST00000517169 324 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC092709.1-201ENST00000521355 1045 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.76□□□□□ -1.49
COL6A2P12110 OR8A2P-201ENST00000528631 952 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 AC016957.1-201ENST00000534895 309 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms