Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.23□□□□□ -1.57
MMP3P08254 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.23□□□□□ -1.57
MMP3P08254 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.23□□□□□ -1.57
MMP3P08254 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.22□□□□□ -1.57
MMP3P08254 CCT8P1-201ENST00000413611 1657 ntBASIC5.22□□□□□ -1.57
MMP3P08254 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
MMP3P08254 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MMP3P08254 AL158825.1-201ENST00000414735 521 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.22□□□□□ -1.57
MMP3P08254 GNG5P5-201ENST00000420444 220 ntBASIC5.22□□□□□ -1.57
MMP3P08254 TCEA1P2-201ENST00000420496 906 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.22□□□□□ -1.57
MMP3P08254 AL136231.1-201ENST00000429407 730 ntBASIC5.22□□□□□ -1.57
MMP3P08254 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MMP3P08254 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.22□□□□□ -1.57
MMP3P08254 MED6P1-201ENST00000439659 713 ntBASIC5.22□□□□□ -1.57
MMP3P08254 MTND1P26-201ENST00000440488 538 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC092691.2-201ENST00000461787 803 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC008379.1-201ENST00000463655 464 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC011276.1-201ENST00000469688 323 ntBASIC5.22□□□□□ -1.57
MMP3P08254 HMGB1P38-201ENST00000490557 577 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC096571.1-202ENST00000506634 735 ntBASIC5.22□□□□□ -1.57
MMP3P08254 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MMP3P08254 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.22□□□□□ -1.57
MMP3P08254 AL049830.4-201ENST00000555149 351 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC021483.2-201ENST00000567415 758 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.22□□□□□ -1.57
MMP3P08254 KPNA2P3-201ENST00000584190 848 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC008507.2-201ENST00000588402 1176 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC020910.2-201ENST00000603635 610 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.22□□□□□ -1.57
MMP3P08254 BX005214.3-202ENST00000619809 325 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AC068831.8-201ENST00000620171 435 ntBASIC5.22□□□□□ -1.57
MMP3P08254 AP000648.2-201ENST00000624182 404 ntBASIC5.22□□□□□ -1.57
MMP3P08254 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.22□□□□□ -1.57
MMP3P08254 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.22□□□□□ -1.57
MMP3P08254 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.22□□□□□ -1.57
MMP3P08254 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MMP3P08254 A2MP1-204ENST00000566278 4130 ntBASIC5.22□□□□□ -1.57
MMP3P08254 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.22□□□□□ -1.57
MMP3P08254 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MMP3P08254 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
MMP3P08254 ADAM24P-201ENST00000398655 2101 ntBASIC5.21□□□□□ -1.57
MMP3P08254 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
MMP3P08254 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.21□□□□□ -1.58
MMP3P08254 AC021146.4-201ENST00000309229 279 ntBASIC5.21□□□□□ -1.58
MMP3P08254 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MMP3P08254 RNA5SP509-201ENST00000364577 119 ntBASIC5.21□□□□□ -1.58
MMP3P08254 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MMP3P08254 ATF1P1-201ENST00000406040 927 ntBASIC5.21□□□□□ -1.58
MMP3P08254 AC096533.1-201ENST00000411645 353 ntBASIC5.21□□□□□ -1.58
MMP3P08254 RPL17P36-201ENST00000420302 549 ntBASIC5.21□□□□□ -1.58
MMP3P08254 AL354766.1-201ENST00000423396 542 ntBASIC5.21□□□□□ -1.58
MMP3P08254 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.21□□□□□ -1.58
MMP3P08254 RRM2P4-201ENST00000441721 562 ntBASIC5.21□□□□□ -1.58
MMP3P08254 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.21□□□□□ -1.58
MMP3P08254 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.21□□□□□ -1.58
MMP3P08254 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 AC090142.1-201ENST00000465776 462 ntBASIC5.21□□□□□ -1.58
MMP3P08254 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 AC104763.1-201ENST00000475274 360 ntBASIC5.21□□□□□ -1.58
MMP3P08254 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MMP3P08254 AC026407.1-201ENST00000518369 204 ntBASIC5.21□□□□□ -1.58
MMP3P08254 OR7E13P-201ENST00000526052 910 ntBASIC5.21□□□□□ -1.58
MMP3P08254 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.21□□□□□ -1.58
MMP3P08254 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.21□□□□□ -1.58
MMP3P08254 FKBP1BP1-201ENST00000553366 325 ntBASIC5.21□□□□□ -1.58
MMP3P08254 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.21□□□□□ -1.58
MMP3P08254 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.21□□□□□ -1.58
MMP3P08254 MIR4675-201ENST00000577898 77 ntBASIC5.21□□□□□ -1.58
MMP3P08254 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.21□□□□□ -1.58
MMP3P08254 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 AL121890.3-201ENST00000618494 516 ntBASIC5.21□□□□□ -1.58
MMP3P08254 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.21□□□□□ -1.58
MMP3P08254 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.21□□□□□ -1.58
MMP3P08254 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.21□□□□□ -1.58
MMP3P08254 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MMP3P08254 AP000473.2-201ENST00000602659 1537 ntBASIC5.21□□□□□ -1.58
MMP3P08254 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MMP3P08254 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MMP3P08254 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 ZNF90P1-201ENST00000480493 1951 ntBASIC5.2□□□□□ -1.58
MMP3P08254 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MMP3P08254 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 AC125257.1-201ENST00000560400 2930 ntBASIC5.2□□□□□ -1.58
MMP3P08254 RN7SKP227-201ENST00000364445 330 ntBASIC5.2□□□□□ -1.58
MMP3P08254 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.2□□□□□ -1.58
MMP3P08254 MIR659-201ENST00000384963 97 ntBASIC5.2□□□□□ -1.58
MMP3P08254 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MMP3P08254 ARL4AP5-201ENST00000404372 599 ntBASIC5.2□□□□□ -1.58
MMP3P08254 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms