Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC006499.5-201ENST00000505037 514 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 AC007991.1-201ENST00000522680 631 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.49□□□□□ -1.53
COL5A2P05997 AC096577.2-201ENST00000611455 153 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 AL157762.1-201ENST00000619612 415 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 AP003400.6-201ENST00000624698 740 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 OR5BE1P-202ENST00000641168 1176 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.49□□□□□ -1.53
COL5A2P05997 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A2P05997 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
COL5A2P05997 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.49□□□□□ -1.53
COL5A2P05997 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 MIR483-201ENST00000385070 76 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 RPS20P25-201ENST00000412447 352 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.48□□□□□ -1.53
COL5A2P05997 RPS11P1-201ENST00000451072 473 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.48□□□□□ -1.53
COL5A2P05997 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A2P05997 AL139099.1-201ENST00000497398 403 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 RN7SKP141-201ENST00000516167 338 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A2P05997 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.48□□□□□ -1.53
COL5A2P05997 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
COL5A2P05997 AC005255.1-201ENST00000593748 216 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.48□□□□□ -1.53
COL5A2P05997 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A2P05997 SRGNP1-201ENST00000603392 451 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 AC015967.1-201ENST00000619893 476 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A2P05997 MAPK10-286ENST00000641208 8747 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 AC024560.2-201ENST00000507981 1497 ntBASIC5.48□□□□□ -1.53
COL5A2P05997 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A2P05997 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A2P05997 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COL5A2P05997 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL5A2P05997 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A2P05997 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A2P05997 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL5A2P05997 RNU1-44P-201ENST00000384453 163 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A2P05997 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.47□□□□□ -1.53
COL5A2P05997 GTF3AP5-201ENST00000442645 697 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 FCF1P7-201ENST00000451185 558 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 RPS20P21-201ENST00000466859 343 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 RPL7P1-201ENST00000468161 747 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 RPL7P9-201ENST00000468715 747 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 RPL23AP37-201ENST00000479658 549 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 HMGB3P16-201ENST00000508037 287 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 RNA5SP303-201ENST00000516192 130 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.47□□□□□ -1.53
COL5A2P05997 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.47□□□□□ -1.53
COL5A2P05997 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.47□□□□□ -1.53
COL5A2P05997 AC114878.2-201ENST00000604863 1251 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 MIR6868-201ENST00000611215 58 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 AC019176.2-201ENST00000611579 315 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 AP000432.2-201ENST00000624164 2048 ntBASIC5.47□□□□□ -1.53
COL5A2P05997 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
COL5A2P05997 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.47□□□□□ -1.53
COL5A2P05997 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A2P05997 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A2P05997 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
COL5A2P05997 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
COL5A2P05997 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A2P05997 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A2P05997 SNORA57.3-201ENST00000411095 141 ntBASIC5.46□□□□□ -1.53
COL5A2P05997 AC009506.2-201ENST00000420635 840 ntBASIC5.46□□□□□ -1.53
COL5A2P05997 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.46□□□□□ -1.53
COL5A2P05997 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A2P05997 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A2P05997 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.46□□□□□ -1.53
COL5A2P05997 OR9M1P-201ENST00000459641 921 ntBASIC5.46□□□□□ -1.53
COL5A2P05997 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.46□□□□□ -1.53
COL5A2P05997 BNIP3P41-201ENST00000503774 571 ntBASIC5.46□□□□□ -1.53
COL5A2P05997 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.46□□□□□ -1.53
COL5A2P05997 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.46□□□□□ -1.53
COL5A2P05997 MIR3200-201ENST00000580767 85 ntBASIC5.46□□□□□ -1.53
COL5A2P05997 AC110743.1-201ENST00000584870 478 ntBASIC5.46□□□□□ -1.53
COL5A2P05997 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL5A2P05997 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A2P05997 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
COL5A2P05997 TET1P1-201ENST00000426627 2301 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms