Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC090142.1-201ENST00000465776 462 ntBASIC5.6□□□□□ -1.51
MBD4O95243 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.6□□□□□ -1.51
MBD4O95243 MTND4LP2-201ENST00000502312 285 ntBASIC5.6□□□□□ -1.51
MBD4O95243 AC111193.1-201ENST00000504097 155 ntBASIC5.6□□□□□ -1.51
MBD4O95243 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.6□□□□□ -1.51
MBD4O95243 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MBD4O95243 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.6□□□□□ -1.51
MBD4O95243 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.6□□□□□ -1.51
MBD4O95243 AC055764.2-201ENST00000610089 670 ntBASIC5.6□□□□□ -1.51
MBD4O95243 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.6□□□□□ -1.51
MBD4O95243 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.6□□□□□ -1.51
MBD4O95243 AC016957.2-201ENST00000616998 848 ntBASIC5.6□□□□□ -1.51
MBD4O95243 AL163051.2-201ENST00000618976 735 ntBASIC5.6□□□□□ -1.51
MBD4O95243 AC004232.3-201ENST00000622977 525 ntBASIC5.6□□□□□ -1.51
MBD4O95243 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MBD4O95243 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD4O95243 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD4O95243 PHKBP1-201ENST00000450951 1951 ntBASIC5.6□□□□□ -1.51
MBD4O95243 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.6□□□□□ -1.51
MBD4O95243 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD4O95243 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MBD4O95243 SMG1P4-204ENST00000523028 4131 ntBASIC5.59□□□□□ -1.51
MBD4O95243 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD4O95243 DHX40P1-201ENST00000588725 1412 ntBASIC5.59□□□□□ -1.51
MBD4O95243 CASC19-206ENST00000641028 1430 ntBASIC5.59□□□□□ -1.51
MBD4O95243 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
MBD4O95243 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD4O95243 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD4O95243 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD4O95243 AC009229.4-201ENST00000623854 1947 ntBASIC5.59□□□□□ -1.51
MBD4O95243 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD4O95243 SNORD113.2-201ENST00000364166 89 ntBASIC5.59□□□□□ -1.51
MBD4O95243 RNU6-178P-201ENST00000384631 104 ntBASIC5.59□□□□□ -1.51
MBD4O95243 RNA5SP397-201ENST00000391323 118 ntBASIC5.59□□□□□ -1.51
MBD4O95243 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.59□□□□□ -1.51
MBD4O95243 LINC01881-201ENST00000416103 412 ntBASIC5.59□□□□□ -1.51
MBD4O95243 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MBD4O95243 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD4O95243 AL353093.1-201ENST00000441292 436 ntBASIC5.59□□□□□ -1.51
MBD4O95243 CYCSP42-201ENST00000450823 238 ntBASIC5.59□□□□□ -1.51
MBD4O95243 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD4O95243 OR52A4P-201ENST00000472867 958 ntBASIC5.59□□□□□ -1.51
MBD4O95243 AC104687.1-201ENST00000485829 412 ntBASIC5.59□□□□□ -1.51
MBD4O95243 AC025164.1-201ENST00000496249 478 ntBASIC5.59□□□□□ -1.51
MBD4O95243 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD4O95243 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD4O95243 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD4O95243 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD4O95243 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
MBD4O95243 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD4O95243 CR383656.14-201ENST00000551951 406 ntBASIC5.59□□□□□ -1.51
MBD4O95243 PSMA6P4-201ENST00000603247 718 ntBASIC5.59□□□□□ -1.51
MBD4O95243 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD4O95243 AL158211.2-201ENST00000607282 395 ntBASIC5.59□□□□□ -1.51
MBD4O95243 U3.53-201ENST00000628922 216 ntBASIC5.59□□□□□ -1.51
MBD4O95243 AL031595.2-201ENST00000624215 19071 ntBASIC5.59□□□□□ -1.51
MBD4O95243 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MBD4O95243 AL031119.1-201ENST00000404707 1879 ntBASIC5.59□□□□□ -1.51
MBD4O95243 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
MBD4O95243 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
MBD4O95243 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
MBD4O95243 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
MBD4O95243 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
MBD4O95243 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MBD4O95243 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD4O95243 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
MBD4O95243 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.58□□□□□ -1.52
MBD4O95243 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MBD4O95243 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD4O95243 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MBD4O95243 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MBD4O95243 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MBD4O95243 IGKV7-3-201ENST00000357453 298 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AP000580.1-201ENST00000404439 358 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AC013404.1-201ENST00000413068 249 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.58□□□□□ -1.52
MBD4O95243 PNRC2P1-201ENST00000423940 420 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.58□□□□□ -1.52
MBD4O95243 MED6P1-201ENST00000439659 713 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.58□□□□□ -1.52
MBD4O95243 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD4O95243 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD4O95243 AC069304.1-201ENST00000491593 704 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AC007016.1-201ENST00000512110 244 ntBASIC5.58□□□□□ -1.52
MBD4O95243 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.58□□□□□ -1.52
MBD4O95243 RNU6-347P-201ENST00000516658 105 ntBASIC5.58□□□□□ -1.52
MBD4O95243 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD4O95243 AP002812.4-201ENST00000532139 286 ntBASIC5.58□□□□□ -1.52
MBD4O95243 UBTFL9-201ENST00000534504 1148 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AC209154.1-201ENST00000582156 337 ntBASIC5.58□□□□□ -1.52
MBD4O95243 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD4O95243 AC098483.2-201ENST00000603158 454 ntBASIC5.58□□□□□ -1.52
MBD4O95243 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.58□□□□□ -1.52
MBD4O95243 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.58□□□□□ -1.52
MBD4O95243 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MBD4O95243 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD4O95243 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
MBD4O95243 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MBD4O95243 AL731532.2-201ENST00000623542 1953 ntBASIC5.58□□□□□ -1.52
MBD4O95243 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms