Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC015813.6-201ENST00000624409 5808 ntBASIC4.33□□□□□ -1.72
HCN1O60741 CYP1D1P-201ENST00000416662 1433 ntBASIC4.32□□□□□ -1.72
HCN1O60741 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HCN1O60741 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HCN1O60741 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.32□□□□□ -1.72
HCN1O60741 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.32□□□□□ -1.72
HCN1O60741 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HCN1O60741 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HCN1O60741 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HCN1O60741 RNA5SP505-201ENST00000364748 108 ntBASIC4.32□□□□□ -1.72
HCN1O60741 MIR7-1-201ENST00000384871 110 ntBASIC4.32□□□□□ -1.72
HCN1O60741 ATP5F1P2-201ENST00000398143 760 ntBASIC4.32□□□□□ -1.72
HCN1O60741 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HCN1O60741 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.32□□□□□ -1.72
HCN1O60741 RN7SKP267-201ENST00000410381 285 ntBASIC4.32□□□□□ -1.72
HCN1O60741 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.32□□□□□ -1.72
HCN1O60741 BUD31P2-201ENST00000449374 300 ntBASIC4.32□□□□□ -1.72
HCN1O60741 IFNWP4-201ENST00000453148 294 ntBASIC4.32□□□□□ -1.72
HCN1O60741 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.32□□□□□ -1.72
HCN1O60741 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HCN1O60741 RPL5P30-201ENST00000465511 891 ntBASIC4.32□□□□□ -1.72
HCN1O60741 RPL23AP65-201ENST00000475608 468 ntBASIC4.32□□□□□ -1.72
HCN1O60741 OR51K1P-201ENST00000510214 950 ntBASIC4.32□□□□□ -1.72
HCN1O60741 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AC067904.2-201ENST00000517322 1283 ntBASIC4.32□□□□□ -1.72
HCN1O60741 VTA1P2-201ENST00000520205 911 ntBASIC4.32□□□□□ -1.72
HCN1O60741 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HCN1O60741 DYNLL1P4-201ENST00000549314 266 ntBASIC4.32□□□□□ -1.72
HCN1O60741 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.32□□□□□ -1.72
HCN1O60741 AC092868.3-201ENST00000560515 784 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.32□□□□□ -1.72
HCN1O60741 AC093249.4-201ENST00000564755 259 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.32□□□□□ -1.72
HCN1O60741 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.32□□□□□ -1.72
HCN1O60741 SLC25A36P1-201ENST00000590111 465 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.32□□□□□ -1.72
HCN1O60741 AC130352.1-201ENST00000602979 661 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AC034236.3-201ENST00000605999 461 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AC020658.4-201ENST00000613987 684 ntBASIC4.32□□□□□ -1.72
HCN1O60741 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.32□□□□□ -1.72
HCN1O60741 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HCN1O60741 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HCN1O60741 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HCN1O60741 AC027290.2-201ENST00000623210 18662 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AC007342.7-201ENST00000624610 2337 ntBASIC4.32□□□□□ -1.72
HCN1O60741 AL672167.1-203ENST00000641299 2975 ntBASIC4.32□□□□□ -1.72
HCN1O60741 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HCN1O60741 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HCN1O60741 AP001002.1-201ENST00000625148 1513 ntBASIC4.31□□□□□ -1.72
HCN1O60741 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.31□□□□□ -1.72
HCN1O60741 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 DHX40P1-201ENST00000588725 1412 ntBASIC4.31□□□□□ -1.72
HCN1O60741 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HCN1O60741 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 AL442639.1-201ENST00000625030 1899 ntBASIC4.31□□□□□ -1.72
HCN1O60741 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HCN1O60741 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HCN1O60741 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 RNU6-225P-201ENST00000384613 103 ntBASIC4.31□□□□□ -1.72
HCN1O60741 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HCN1O60741 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HCN1O60741 ST13P16-201ENST00000401760 781 ntBASIC4.31□□□□□ -1.72
HCN1O60741 ARL4AP5-201ENST00000404372 599 ntBASIC4.31□□□□□ -1.72
HCN1O60741 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.31□□□□□ -1.72
HCN1O60741 RPL12P34-201ENST00000424532 479 ntBASIC4.31□□□□□ -1.72
HCN1O60741 IPMKP1-201ENST00000425988 855 ntBASIC4.31□□□□□ -1.72
HCN1O60741 DNAJC19P7-201ENST00000428811 344 ntBASIC4.31□□□□□ -1.72
HCN1O60741 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.31□□□□□ -1.72
HCN1O60741 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.31□□□□□ -1.72
HCN1O60741 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.31□□□□□ -1.72
HCN1O60741 RN7SL481P-201ENST00000477764 299 ntBASIC4.31□□□□□ -1.72
HCN1O60741 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.31□□□□□ -1.72
HCN1O60741 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 NDUFB4P12-201ENST00000513465 390 ntBASIC4.31□□□□□ -1.72
HCN1O60741 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.31□□□□□ -1.72
HCN1O60741 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HCN1O60741 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.31□□□□□ -1.72
HCN1O60741 AC087888.1-201ENST00000550884 1254 ntBASIC4.31□□□□□ -1.72
HCN1O60741 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.31□□□□□ -1.72
HCN1O60741 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 AC068714.1-201ENST00000559623 800 ntBASIC4.31□□□□□ -1.72
HCN1O60741 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 AP005119.2-201ENST00000579735 1105 ntBASIC4.31□□□□□ -1.72
HCN1O60741 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN1O60741 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.31□□□□□ -1.72
HCN1O60741 AF230666.2-201ENST00000602328 725 ntBASIC4.31□□□□□ -1.72
HCN1O60741 AC005520.3-201ENST00000602874 370 ntBASIC4.31□□□□□ -1.72
HCN1O60741 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCN1O60741 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms