Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.4□□□□□ -1.71
LSM1O15116 AC006065.1-201ENST00000422539 802 ntBASIC4.4□□□□□ -1.71
LSM1O15116 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.4□□□□□ -1.71
LSM1O15116 MTCYBP29-201ENST00000436327 1006 ntBASIC4.4□□□□□ -1.71
LSM1O15116 CEACAMP7-201ENST00000444105 496 ntBASIC4.4□□□□□ -1.71
LSM1O15116 RPL31P20-201ENST00000449593 360 ntBASIC4.4□□□□□ -1.71
LSM1O15116 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.4□□□□□ -1.71
LSM1O15116 PSMC1P13-201ENST00000458195 985 ntBASIC4.4□□□□□ -1.71
LSM1O15116 RPL7AP6-201ENST00000477943 801 ntBASIC4.4□□□□□ -1.71
LSM1O15116 METTL15P1-201ENST00000481421 1045 ntBASIC4.4□□□□□ -1.71
LSM1O15116 SYT14P1-201ENST00000481459 721 ntBASIC4.4□□□□□ -1.71
LSM1O15116 AC090013.1-201ENST00000485147 480 ntBASIC4.4□□□□□ -1.71
LSM1O15116 HAUS1P1-201ENST00000505275 832 ntBASIC4.4□□□□□ -1.71
LSM1O15116 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.4□□□□□ -1.71
LSM1O15116 RNU2-30P-201ENST00000516209 141 ntBASIC4.4□□□□□ -1.71
LSM1O15116 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.4□□□□□ -1.71
LSM1O15116 IGHV3-32-201ENST00000519182 355 ntBASIC4.4□□□□□ -1.71
LSM1O15116 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.4□□□□□ -1.71
LSM1O15116 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.4□□□□□ -1.71
LSM1O15116 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.4□□□□□ -1.71
LSM1O15116 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.4□□□□□ -1.71
LSM1O15116 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.4□□□□□ -1.71
LSM1O15116 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.4□□□□□ -1.71
LSM1O15116 ADAM3B-201ENST00000569937 840 ntBASIC4.4□□□□□ -1.71
LSM1O15116 AC110741.2-201ENST00000605278 268 ntBASIC4.4□□□□□ -1.71
LSM1O15116 MIR6862-1-201ENST00000613016 70 ntBASIC4.4□□□□□ -1.71
LSM1O15116 MIR6862-2-201ENST00000614755 70 ntBASIC4.4□□□□□ -1.71
LSM1O15116 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.4□□□□□ -1.71
LSM1O15116 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LSM1O15116 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.4□□□□□ -1.71
LSM1O15116 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 AC109780.1-201ENST00000451768 1344 ntBASIC4.4□□□□□ -1.71
LSM1O15116 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.4□□□□□ -1.71
LSM1O15116 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LSM1O15116 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.4□□□□□ -1.71
LSM1O15116 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LSM1O15116 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.39□□□□□ -1.71
LSM1O15116 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.39□□□□□ -1.71
LSM1O15116 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LSM1O15116 RN7SKP269-201ENST00000365545 319 ntBASIC4.39□□□□□ -1.71
LSM1O15116 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.39□□□□□ -1.71
LSM1O15116 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.39□□□□□ -1.71
LSM1O15116 AC240504.1-201ENST00000395709 845 ntBASIC4.39□□□□□ -1.71
LSM1O15116 FCF1P5-201ENST00000406490 482 ntBASIC4.39□□□□□ -1.71
LSM1O15116 RNU4-34P-201ENST00000410431 124 ntBASIC4.39□□□□□ -1.71
LSM1O15116 RN7SKP229-201ENST00000410465 302 ntBASIC4.39□□□□□ -1.71
LSM1O15116 RN7SKP100-201ENST00000411258 284 ntBASIC4.39□□□□□ -1.71
LSM1O15116 CASKP1-201ENST00000412870 582 ntBASIC4.39□□□□□ -1.71
LSM1O15116 COX6B1P1-201ENST00000415962 213 ntBASIC4.39□□□□□ -1.71
LSM1O15116 RPL12P34-201ENST00000424532 479 ntBASIC4.39□□□□□ -1.71
LSM1O15116 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.39□□□□□ -1.71
LSM1O15116 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.39□□□□□ -1.71
LSM1O15116 FCF1P7-201ENST00000451185 558 ntBASIC4.39□□□□□ -1.71
LSM1O15116 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.39□□□□□ -1.71
LSM1O15116 AL645939.1-201ENST00000453429 797 ntBASIC4.39□□□□□ -1.71
LSM1O15116 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.39□□□□□ -1.71
LSM1O15116 RN7SL808P-201ENST00000496066 299 ntBASIC4.39□□□□□ -1.71
LSM1O15116 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.39□□□□□ -1.71
LSM1O15116 AC147055.3-201ENST00000510547 851 ntBASIC4.39□□□□□ -1.71
LSM1O15116 SOX5P1-201ENST00000524155 1127 ntBASIC4.39□□□□□ -1.71
LSM1O15116 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.39□□□□□ -1.71
LSM1O15116 AP006289.1-201ENST00000538089 277 ntBASIC4.39□□□□□ -1.71
LSM1O15116 AC091515.1-201ENST00000548110 679 ntBASIC4.39□□□□□ -1.71
LSM1O15116 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
LSM1O15116 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LSM1O15116 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.39□□□□□ -1.71
LSM1O15116 ADAD1P2-201ENST00000588476 646 ntBASIC4.39□□□□□ -1.71
LSM1O15116 BNIP3P32-201ENST00000600015 554 ntBASIC4.39□□□□□ -1.71
LSM1O15116 BMS1P7-201ENST00000602440 1052 ntBASIC4.39□□□□□ -1.71
LSM1O15116 AC090181.2-201ENST00000602975 672 ntBASIC4.39□□□□□ -1.71
LSM1O15116 AL445222.1-201ENST00000607259 628 ntBASIC4.39□□□□□ -1.71
LSM1O15116 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.39□□□□□ -1.71
LSM1O15116 MIR6729-201ENST00000618194 65 ntBASIC4.39□□□□□ -1.71
LSM1O15116 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LSM1O15116 AC091905.2-201ENST00000623143 306 ntBASIC4.39□□□□□ -1.71
LSM1O15116 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.39□□□□□ -1.71
LSM1O15116 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LSM1O15116 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.39□□□□□ -1.71
LSM1O15116 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms