Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC7.4□□□□□ -1.22
CUX2O14529 AC025175.1-201ENST00000606482 759 ntBASIC7.4□□□□□ -1.22
CUX2O14529 AL138820.1-201ENST00000617901 5305 ntBASIC7.4□□□□□ -1.22
CUX2O14529 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUX2O14529 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUX2O14529 MTCO1P46-201ENST00000451639 1491 ntBASIC7.4□□□□□ -1.23
CUX2O14529 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUX2O14529 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUX2O14529 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.39□□□□□ -1.23
CUX2O14529 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC7.39□□□□□ -1.23
CUX2O14529 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUX2O14529 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUX2O14529 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CUX2O14529 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUX2O14529 RPL21P17-201ENST00000397467 475 ntBASIC7.39□□□□□ -1.23
CUX2O14529 NPM1P37-201ENST00000403105 874 ntBASIC7.39□□□□□ -1.23
CUX2O14529 RN7SKP182-201ENST00000410772 298 ntBASIC7.39□□□□□ -1.23
CUX2O14529 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC7.39□□□□□ -1.23
CUX2O14529 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC7.39□□□□□ -1.23
CUX2O14529 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC7.39□□□□□ -1.23
CUX2O14529 RPS20P21-201ENST00000466859 343 ntBASIC7.39□□□□□ -1.23
CUX2O14529 AL139099.1-201ENST00000497398 403 ntBASIC7.39□□□□□ -1.23
CUX2O14529 LEF1-218ENST00000512172 598 ntTSL 2 BASIC7.39□□□□□ -1.23
CUX2O14529 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.39□□□□□ -1.23
CUX2O14529 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC7.39□□□□□ -1.23
CUX2O14529 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.39□□□□□ -1.23
CUX2O14529 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUX2O14529 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUX2O14529 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CUX2O14529 NACA3P-201ENST00000359690 648 ntBASIC7.38□□□□□ -1.23
CUX2O14529 SNORA48.2-201ENST00000390926 124 ntBASIC7.38□□□□□ -1.23
CUX2O14529 RPL21P43-201ENST00000425440 472 ntBASIC7.38□□□□□ -1.23
CUX2O14529 AL136126.1-201ENST00000473603 402 ntBASIC7.38□□□□□ -1.23
CUX2O14529 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.38□□□□□ -1.23
CUX2O14529 AC087499.8-201ENST00000578406 226 ntBASIC7.38□□□□□ -1.23
CUX2O14529 AC023762.1-201ENST00000603280 584 ntBASIC7.38□□□□□ -1.23
CUX2O14529 AC092354.2-201ENST00000607786 514 ntBASIC7.38□□□□□ -1.23
CUX2O14529 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CUX2O14529 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.37□□□□□ -1.23
CUX2O14529 AC010374.1-201ENST00000503762 1237 ntBASIC7.37□□□□□ -1.23
CUX2O14529 LSM3P2-201ENST00000551246 273 ntBASIC7.37□□□□□ -1.23
CUX2O14529 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.37□□□□□ -1.23
CUX2O14529 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.37□□□□□ -1.23
CUX2O14529 AC005255.1-201ENST00000593748 216 ntBASIC7.37□□□□□ -1.23
CUX2O14529 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.37□□□□□ -1.23
CUX2O14529 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC7.37□□□□□ -1.23
CUX2O14529 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUX2O14529 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUX2O14529 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CUX2O14529 USP9YP36-201ENST00000424581 829 ntBASIC7.36□□□□□ -1.23
CUX2O14529 AL691449.1-201ENST00000426570 421 ntBASIC7.36□□□□□ -1.23
CUX2O14529 BX119904.3-201ENST00000428194 957 ntBASIC7.36□□□□□ -1.23
CUX2O14529 USP9YP31-201ENST00000431405 881 ntBASIC7.36□□□□□ -1.23
CUX2O14529 AL512326.1-201ENST00000443050 721 ntBASIC7.36□□□□□ -1.23
CUX2O14529 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CUX2O14529 CREM-238ENST00000488741 651 ntTSL 2 BASIC7.36□□□□□ -1.23
CUX2O14529 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.36□□□□□ -1.23
CUX2O14529 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.36□□□□□ -1.23
CUX2O14529 AC104984.5-201ENST00000586878 94 ntBASIC7.36□□□□□ -1.23
CUX2O14529 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC7.36□□□□□ -1.23
CUX2O14529 AC021242.1-201ENST00000507315 2035 ntBASIC7.36□□□□□ -1.23
CUX2O14529 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CUX2O14529 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.36□□□□□ -1.23
CUX2O14529 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CUX2O14529 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.36□□□□□ -1.23
CUX2O14529 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CUX2O14529 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CUX2O14529 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CUX2O14529 OR11H4-201ENST00000315409 1082 ntBASIC7.36□□□□□ -1.23
CUX2O14529 MIR128-1-201ENST00000384921 82 ntBASIC7.36□□□□□ -1.23
CUX2O14529 AC245052.5-201ENST00000416320 649 ntBASIC7.36□□□□□ -1.23
CUX2O14529 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.36□□□□□ -1.23
CUX2O14529 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.36□□□□□ -1.23
CUX2O14529 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7.36□□□□□ -1.23
CUX2O14529 ENSA-211ENST00000503345 793 ntTSL 3 BASIC7.36□□□□□ -1.23
CUX2O14529 AC004069.2-201ENST00000505438 1114 ntBASIC7.36□□□□□ -1.23
CUX2O14529 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUX2O14529 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.36□□□□□ -1.23
CUX2O14529 BPIFA4P-203ENST00000603168 689 ntBASIC7.36□□□□□ -1.23
CUX2O14529 AC005972.3-201ENST00000606304 481 ntBASIC7.36□□□□□ -1.23
CUX2O14529 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CUX2O14529 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CUX2O14529 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUX2O14529 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUX2O14529 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CUX2O14529 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CUX2O14529 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.35□□□□□ -1.23
CUX2O14529 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CUX2O14529 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CUX2O14529 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CUX2O14529 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CUX2O14529 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.35□□□□□ -1.23
CUX2O14529 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms