Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC063949.1-201ENST00000552900 865 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 AL137072.1-201ENST00000603444 466 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AL354984.3-201ENST00000604803 325 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC096553.1-201ENST00000605169 829 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC025175.1-201ENST00000606482 759 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AL021997.2-201ENST00000615674 271 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC007546.1-201ENST00000619452 559 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 MIR4727-201ENST00000622232 55 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SDCBPO00560 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SDCBPO00560 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 DDX18P3-201ENST00000404856 2007 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SDCBPO00560 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 AC025031.4-201ENST00000621248 3271 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 OR5P1P-201ENST00000299512 925 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.57□□□□□ -1.84
SDCBPO00560 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SDCBPO00560 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SDCBPO00560 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 SEPT7P2-202ENST00000398921 823 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 IQCB2P-201ENST00000401788 1633 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.57□□□□□ -1.84
SDCBPO00560 AL590139.1-201ENST00000416267 400 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC073136.2-201ENST00000417282 849 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AL139095.3-201ENST00000419672 1203 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AL356387.2-201ENST00000422272 243 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.57□□□□□ -1.84
SDCBPO00560 RPEP3-201ENST00000425462 676 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.57□□□□□ -1.84
SDCBPO00560 YWHAEP5-201ENST00000431545 765 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 LYPLA1P1-201ENST00000434514 622 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 FTH1P16-201ENST00000435241 552 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC098583.1-201ENST00000480875 255 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SDCBPO00560 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.57□□□□□ -1.84
SDCBPO00560 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 AK3P4-201ENST00000504283 583 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC093720.1-201ENST00000505681 714 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.57□□□□□ -1.84
SDCBPO00560 RN7SKP5-201ENST00000517045 272 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AP002981.1-201ENST00000517692 975 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SDCBPO00560 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 KCTD9P6-201ENST00000522306 950 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 AC107918.3-201ENST00000533272 382 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 AC006064.5-201ENST00000541782 248 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 AL109766.1-201ENST00000555080 552 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC010547.7-201ENST00000570323 333 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.57□□□□□ -1.84
SDCBPO00560 AC020915.5-201ENST00000596836 964 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 RPL12P25-202ENST00000598100 674 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC115286.1-201ENST00000604298 434 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 uc_338.13-201ENST00000618243 179 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 AC095038.2-201ENST00000621464 1070 ntBASIC3.57□□□□□ -1.84
SDCBPO00560 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SDCBPO00560 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.57□□□□□ -1.84
SDCBPO00560 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.57□□□□□ -1.84
SDCBPO00560 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.57□□□□□ -1.84
SDCBPO00560 NAMPTP1-201ENST00000440465 2514 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 AC018555.1-201ENST00000567548 1980 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 MIR331-201ENST00000362302 94 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 RNVU1-6-201ENST00000364688 164 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 RNA5SP505-201ENST00000364748 108 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SDCBPO00560 MIR129-1-201ENST00000384972 72 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.56□□□□□ -1.84
SDCBPO00560 RBMY2KP-201ENST00000418221 992 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 PTP4A1P1-201ENST00000420539 515 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms