Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DDX6P1-205ENST00000441966 1436 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM1O00151 RNU4-4P-201ENST00000364588 130 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 AL109941.1-201ENST00000401925 229 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 OR1F12-201ENST00000402365 945 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 AC093162.1-201ENST00000419682 124 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AC007394.1-201ENST00000421941 531 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 Z74021.1-201ENST00000423610 407 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 CR848007.2-201ENST00000424918 787 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AL606490.7-201ENST00000433136 191 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 MTCYBP29-201ENST00000436327 1006 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 RHOT1P3-201ENST00000436571 331 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 CLIC4P1-201ENST00000453177 535 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AC096741.1-201ENST00000472250 846 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 RPL37AP8-201ENST00000494116 276 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 AC016550.3-201ENST00000515706 767 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 RN7SKP147-201ENST00000517154 244 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 OR7E128P-201ENST00000532736 1024 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM1O00151 AC068446.3-201ENST00000555285 382 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM1O00151 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 SNORA74C-1-201ENST00000580726 201 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AC007448.1-201ENST00000582714 234 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 MIR4691-201ENST00000583764 85 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 RPL7P50-201ENST00000600588 727 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AC105254.2-201ENST00000603636 436 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AC015802.5-201ENST00000607478 399 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AL021707.7-201ENST00000607991 416 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AL022401.1-201ENST00000619498 108 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 AC019206.1-201ENST00000621938 425 ntBASIC4.47□□□□□ -1.69
PDLIM1O00151 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM1O00151 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM1O00151 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM1O00151 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
PDLIM1O00151 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
PDLIM1O00151 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM1O00151 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM1O00151 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM1O00151 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.46□□□□□ -1.69
PDLIM1O00151 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
PDLIM1O00151 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PDLIM1O00151 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDLIM1O00151 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM1O00151 MTND4P10-201ENST00000446199 1363 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 RNU4-39P-201ENST00000362455 127 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM1O00151 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDLIM1O00151 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDLIM1O00151 CHMP1B2P-201ENST00000399581 597 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM1O00151 CYCSP11-201ENST00000436426 315 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 PA2G4P6-201ENST00000438325 1197 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 ELOCP8-201ENST00000439309 332 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 ELOCP15-201ENST00000442090 332 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC092647.3-201ENST00000443044 633 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 RPL5P13-201ENST00000462840 709 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM1O00151 RPL32P9-201ENST00000487963 407 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM1O00151 COX6B1P5-201ENST00000509843 249 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC108157.1-201ENST00000510511 539 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 RNA5SP43-201ENST00000516559 110 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM1O00151 IGHV3-32-201ENST00000519182 355 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC090151.1-201ENST00000520784 730 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 OR5M7P-201ENST00000526140 972 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.46□□□□□ -1.7
PDLIM1O00151 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM1O00151 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AC093249.4-201ENST00000564755 259 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM1O00151 AC015912.2-201ENST00000571053 181 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC005377.1-201ENST00000605126 456 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AL035461.2-201ENST00000619201 524 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.46□□□□□ -1.7
PDLIM1O00151 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM1O00151 AC007342.7-201ENST00000624610 2337 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 BX005019.1-201ENST00000561881 1810 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM1O00151 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms