Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 RNU1-108P-201ENST00000362556 161 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 Y_RNA.126-201ENST00000363382 111 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 RNA5SP479-201ENST00000364858 117 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 ARL4AP5-201ENST00000404372 599 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL035696.2-201ENST00000407941 709 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 RNA5SP39-201ENST00000411245 120 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL132765.1-201ENST00000434165 553 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 RPL23AP93-201ENST00000440847 484 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 ISCUP1-201ENST00000454451 448 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC010476.1-201ENST00000519111 851 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC015912.2-201ENST00000571053 181 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 VPS35P1-201ENST00000563400 1518 ntBASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMX2-CTNND1H3BSU7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC093909.5-201ENST00000621839 1799 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 OR5P1P-201ENST00000299512 925 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 RNU1-85P-201ENST00000364127 164 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL080315.1-201ENST00000406055 466 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 SNORA81-201ENST00000408493 178 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 TMSB10P2-201ENST00000416049 131 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 ARAFP2-201ENST00000440565 559 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC104651.2-201ENST00000447549 528 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 UQCRHP4-201ENST00000471686 272 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC100770.1-201ENST00000532310 322 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC069366.1-201ENST00000583159 838 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC010857.1-201ENST00000606398 594 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC024941.1-201ENST00000612250 334 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AP000843.1-201ENST00000624880 701 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 VN2R3P-201ENST00000422626 1412 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL445487.1-201ENST00000415694 1580 ntBASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMX2-CTNND1H3BSU7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 RNU1-64P-201ENST00000365443 163 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 RNA5SP366-201ENST00000365454 123 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 CEACAMP8-201ENST00000413902 580 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 AL158073.1-201ENST00000426848 1104 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC239367.2-201ENST00000447309 705 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC053481.1-201ENST00000467217 306 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 RN7SL41P-201ENST00000476144 297 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC091167.1-201ENST00000492017 396 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 MRPL49P2-201ENST00000521066 465 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 AP001160.4-201ENST00000596971 382 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 VN1R85P-201ENST00000601587 426 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 AC005520.3-201ENST00000602874 370 ntBASIC4.34□□□□□ -1.71
TMX2-CTNND1H3BSU7 ARF4P1-201ENST00000605447 541 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms