Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.34□□□□□ -1.56
RGPD3A6NKT7 AL133244.1-201ENST00000456007 258 ntBASIC5.34□□□□□ -1.56
RGPD3A6NKT7 AC108145.1-201ENST00000503770 153 ntBASIC5.34□□□□□ -1.56
RGPD3A6NKT7 MIR4472-2-201ENST00000582069 67 ntBASIC5.34□□□□□ -1.56
RGPD3A6NKT7 MIR5684-201ENST00000585074 65 ntBASIC5.34□□□□□ -1.56
RGPD3A6NKT7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RGPD3A6NKT7 AC005000.2-201ENST00000605468 310 ntBASIC5.34□□□□□ -1.56
RGPD3A6NKT7 AL138721.1-201ENST00000616756 179 ntBASIC5.34□□□□□ -1.56
RGPD3A6NKT7 MIR7975-201ENST00000619350 68 ntBASIC5.34□□□□□ -1.56
RGPD3A6NKT7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.34□□□□□ -1.56
RGPD3A6NKT7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RGPD3A6NKT7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.34□□□□□ -1.56
RGPD3A6NKT7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
RGPD3A6NKT7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 PPIAP3-201ENST00000450588 505 ntBASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AP001002.2-201ENST00000625137 386 ntBASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 AC083837.1-201ENST00000565297 2994 ntBASIC5.33□□□□□ -1.56
RGPD3A6NKT7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 TET1P1-201ENST00000426627 2301 ntBASIC5.33□□□□□ -1.56
RGPD3A6NKT7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RGPD3A6NKT7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 BX119904.3-201ENST00000428194 957 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 RPL7P4-203ENST00000430239 730 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC022655.2-201ENST00000577280 318 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC090312.1-201ENST00000580637 348 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC010503.3-201ENST00000594355 540 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 NXPH1-205ENST00000602349 1953 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 NPM1P37-201ENST00000403105 874 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 RPS7P15-201ENST00000415804 584 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC104849.1-201ENST00000462623 405 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 RPL7P9-201ENST00000468715 747 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 RNA5SP446-201ENST00000515955 82 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 RNU1-103P-201ENST00000516502 125 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AL031985.2-201ENST00000600955 480 ntBASIC5.32□□□□□ -1.56
RGPD3A6NKT7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RGPD3A6NKT7 AC003985.2-201ENST00000562268 1669 ntBASIC5.31□□□□□ -1.56
RGPD3A6NKT7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.31□□□□□ -1.56
RGPD3A6NKT7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 EIF4A1P1-201ENST00000420241 934 ntBASIC5.31□□□□□ -1.56
RGPD3A6NKT7 RPS11P1-201ENST00000451072 473 ntBASIC5.31□□□□□ -1.56
RGPD3A6NKT7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 RPS4XP15-201ENST00000489210 795 ntBASIC5.31□□□□□ -1.56
RGPD3A6NKT7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.31□□□□□ -1.56
RGPD3A6NKT7 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms