Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 VPS35P1-201ENST00000563400 1518 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AC025574.1-201ENST00000554784 1653 ntBASIC5.63□□□□□ -1.51
SHISA3A0PJX4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHISA3A0PJX4 AL359976.1-201ENST00000418655 3528 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RNY3P3-201ENST00000363816 102 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RNU6-657P-201ENST00000383904 107 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RNU6-1227P-201ENST00000383981 107 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RNU6-225P-201ENST00000384613 103 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL445669.1-201ENST00000426743 755 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 USP9YP9-201ENST00000429406 715 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RPS10P21-201ENST00000430654 475 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 DNAJC19P5-201ENST00000443295 316 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RPS23P9-201ENST00000448848 438 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL445687.2-201ENST00000458156 728 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 snoU13.29-201ENST00000459370 104 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC128716.1-201ENST00000475129 166 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RPL36AP51-201ENST00000487216 318 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 FAM172BP-201ENST00000487497 1089 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC008945.1-201ENST00000505144 499 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 SNORA81.2-201ENST00000516868 170 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC090424.1-201ENST00000535243 736 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL162632.2-201ENST00000553933 399 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC007424.1-203ENST00000554613 687 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL132640.2-202ENST00000559732 614 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 MIR4420-201ENST00000583944 77 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 MIR4795-201ENST00000584182 89 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 MIR4428-201ENST00000584884 73 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AL031429.2-201ENST00000602605 649 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 RNU6-87P-201ENST00000607561 108 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC009268.2-201ENST00000621925 457 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 AC061999.1-201ENST00000624454 177 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 CASC19-221ENST00000641309 1382 ntBASIC5.62□□□□□ -1.51
SHISA3A0PJX4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SHISA3A0PJX4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.86-201ENST00000363020 111 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.162-201ENST00000363683 102 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 U3.14-201ENST00000365363 227 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 AL590004.1-201ENST00000405321 300 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 AL357752.1-201ENST00000412817 349 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 UBE2V1P14-201ENST00000415815 558 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 RPL7P57-201ENST00000423238 740 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 AL589872.1-201ENST00000426602 288 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 AC104837.2-201ENST00000427236 424 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 DYNLL1P7-201ENST00000429273 258 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.61□□□□□ -1.51
SHISA3A0PJX4 RPL31P35-201ENST00000431058 377 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 RPEP2-201ENST00000432149 701 ntBASIC5.61□□□□□ -1.51
SHISA3A0PJX4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms