Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 SIAH1P1-201ENST00000479411 923 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 TRBV5-2-201ENST00000489095 273 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 RNU6-488P-201ENST00000515918 99 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 RNA5SP34-201ENST00000516887 130 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 DPPA2P4-201ENST00000563717 878 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC093519.1-201ENST00000566109 298 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC004948.1-201ENST00000609858 672 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC097505.1-201ENST00000610199 565 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC122133.1-201ENST00000613964 233 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC015804.1-201ENST00000622935 435 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AL359757.1-201ENST00000623176 255 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AL445523.1-201ENST00000451184 1362 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC083899.1-201ENST00000454465 3819 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC109315.1-201ENST00000584143 1347 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC025125.1-201ENST00000624743 1922 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 RNU6-249P-201ENST00000363016 102 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 RNU6-931P-201ENST00000363850 107 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 SUGT1P1-201ENST00000379514 476 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 RNU1-74P-201ENST00000384108 171 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 SNORD116-1-201ENST00000384335 95 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AL139098.1-201ENST00000407291 389 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 MORF4L1P6-201ENST00000418771 268 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 SKP1P3-201ENST00000429280 487 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 MTCYBP3-201ENST00000445588 1137 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 FRG2FP-204ENST00000453982 852 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC010307.1-201ENST00000467206 836 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 BZW1P2-201ENST00000473537 826 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC109471.1-201ENST00000511631 612 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 RPL7L1P13-201ENST00000511702 739 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 MTCO1P30-201ENST00000515244 580 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 snoU109.5-201ENST00000516231 132 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 RNU6-232P-201ENST00000517144 64 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 NRBF2P4-201ENST00000520874 850 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC087373.1-201ENST00000524920 491 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 SERPINE4P-201ENST00000554978 281 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC116553.2-201ENST00000564203 463 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 NBR2-204ENST00000587322 63 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC006539.2-201ENST00000601729 572 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC133552.5-201ENST00000604266 540 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC105129.3-201ENST00000605455 485 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AC008115.3-201ENST00000614874 549 ntBASIC5.55□□□□□ -1.52
PCDHGA3Q9Y5H0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms