Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL132640.2-201ENST00000559968 1698 ntBASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CTDP1Q9Y5B0 AL355488.2-201ENST00000609909 2850 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RNU6-623P-201ENST00000363143 105 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RNU6-236P-201ENST00000363886 106 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 Y_RNA.201-201ENST00000364052 96 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RNU4-4P-201ENST00000364588 130 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RNU6-224P-201ENST00000384055 107 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RNU1-74P-201ENST00000384108 171 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 Y_RNA.472-201ENST00000384322 102 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 BTF3L4P1-201ENST00000413813 468 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL139128.1-201ENST00000413921 941 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 XKRYP4-201ENST00000414395 483 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 USP9YP26-201ENST00000421008 661 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 VN1R54P-201ENST00000435210 1049 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 XKRYP5-201ENST00000449659 483 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 MTND4LP3-201ENST00000468320 276 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RPF2P2-201ENST00000504693 896 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC114774.1-201ENST00000507410 1770 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 UGT2B26P-201ENST00000508672 1613 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC092593.2-201ENST00000513866 913 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC117532.1-201ENST00000514638 323 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 RNA5SP373-201ENST00000517271 95 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC084824.1-201ENST00000550917 1005 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 SETP1-201ENST00000556014 845 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC006272.2-201ENST00000594725 163 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC116651.1-201ENST00000609724 556 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 Mico1.1-201ENST00000611698 204 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL121895.2-201ENST00000619558 447 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AC092747.4-201ENST00000620519 1861 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL353662.3-201ENST00000625131 237 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 LINC01739-205ENST00000641890 573 ntBASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CTDP1Q9Y5B0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ELL2P3-201ENST00000457883 1602 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC079298.1-201ENST00000625026 1619 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 NXF4-202ENST00000416098 1465 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AC010132.2-201ENST00000295493 1043 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 VDAC2P1-201ENST00000399358 958 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 CHMP1B2P-201ENST00000399581 597 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 DBIP1-201ENST00000401435 260 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RPL10P10-201ENST00000403509 664 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL136131.1-201ENST00000406079 803 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 RNU4-72P-201ENST00000410754 173 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL354766.1-201ENST00000423396 542 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 AL590762.4-201ENST00000425885 253 ntBASIC6.11□□□□□ -1.43
CTDP1Q9Y5B0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms