Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 SNORA79B-201ENST00000410557 148 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AL133547.1-201ENST00000448546 220 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AP002345.1-201ENST00000456493 928 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 RN7SL691P-201ENST00000494487 301 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 RPS27AP13-201ENST00000498403 237 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AL451086.1-201ENST00000605596 223 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AL451049.1-201ENST00000608672 497 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AC004241.3-201ENST00000611728 517 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AC074276.2-201ENST00000619891 348 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AC019080.5-201ENST00000624891 757 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AC140479.6-201ENST00000633535 357 ntBASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SHROOM4Q9ULL8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AL034370.1-201ENST00000397254 1590 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC008033.1-201ENST00000216407 1162 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC104297.1-201ENST00000393779 870 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 VN1R105P-201ENST00000486595 910 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC016550.3-201ENST00000515706 767 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AL731537.2-201ENST00000561565 951 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AL135786.2-201ENST00000608422 615 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 AC092159.4-201ENST00000624944 550 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 Z82217.1-201ENST00000625157 8149 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 OFD1P5Y-201ENST00000447585 2590 ntBASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC8.59□□□□□ -1.03
SHROOM4Q9ULL8 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
SHROOM4Q9ULL8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 AL136164.3-201ENST00000624429 3978 ntBASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 AC053481.1-201ENST00000467217 306 ntBASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 FABP5P6-201ENST00000510588 409 ntBASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 LARP1BP1-201ENST00000506036 1359 ntBASIC8.58□□□□□ -1.04
SHROOM4Q9ULL8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL583835.1-201ENST00000399570 407 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC097374.1-203ENST00000400783 485 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AP000580.1-201ENST00000404439 358 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 RNU6-628P-201ENST00000410675 107 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL050321.1-201ENST00000432363 400 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC007563.3-201ENST00000433233 371 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 LARP7P4-201ENST00000481075 878 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC021087.2-201ENST00000504656 1203 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 SCARNA13-201ENST00000516672 275 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 SNX6P1-201ENST00000601728 1224 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL133247.2-201ENST00000603236 482 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC091948.2-201ENST00000636510 279 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC073869.7-201ENST00000640874 297 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC027228.2-201ENST00000567141 2154 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 RLIMP2-201ENST00000427891 1563 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 RNU6-525P-201ENST00000363685 104 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms