Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 KPNA2P2-201ENST00000419546 1489 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC010894.1-201ENST00000313760 361 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 RNA5SP394-201ENST00000364216 119 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 Y_RNA.459-201ENST00000384251 102 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 PRRC2CP1-201ENST00000404428 159 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 RPL5P18-201ENST00000406671 891 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 RPL31P52-201ENST00000407532 367 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 RN7SKP86-201ENST00000410454 332 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC018804.1-201ENST00000430381 618 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AL731534.1-201ENST00000434711 269 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AL450996.1-201ENST00000445574 1202 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC007383.1-201ENST00000445875 636 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AL121578.2-201ENST00000448797 447 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC117395.2-201ENST00000463122 1128 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 RPS4XP14-201ENST00000493072 781 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 MTCO1P29-201ENST00000496868 288 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 Y_RNA.711-201ENST00000516993 102 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC107934.1-201ENST00000522215 217 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 IGLVI-42-201ENST00000522485 381 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 OR5BN1P-201ENST00000532955 829 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AP002373.2-201ENST00000541631 1060 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 LSM6P2-201ENST00000552208 177 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 MIR3668-201ENST00000582138 75 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AL355472.4-201ENST00000610233 626 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC037198.3-201ENST00000616754 526 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AL031658.2-201ENST00000616850 651 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 7SK.10-201ENST00000621414 298 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC099667.1-201ENST00000624222 469 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC073592.6-201ENST00000624271 415 ntBASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
LIMD1Q9UGP4 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 RNA5SP85-201ENST00000365378 119 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 MIR1-2-201ENST00000384961 85 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL023807.1-201ENST00000407932 359 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 NDUFB4P5-201ENST00000415445 361 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 OR1AA1P-201ENST00000419597 916 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 RPS15AP30-201ENST00000420976 390 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC018630.2-202ENST00000422992 927 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 ERLEC1P1-201ENST00000433806 578 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 RPL7AP71-201ENST00000451120 739 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 SLC25A51P1-201ENST00000468432 871 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL163540.1-201ENST00000485382 386 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC110792.2-201ENST00000510278 224 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 SCARNA6-201ENST00000515982 265 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC068831.4-201ENST00000556118 109 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 NCAPGP2-201ENST00000557911 754 ntBASIC7.32□□□□□ -1.24
LIMD1Q9UGP4 AC092332.1-201ENST00000563684 829 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms