Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AL121886.1-201ENST00000358609 435 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 SNORD65.1-201ENST00000390889 71 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AL139098.1-201ENST00000407291 389 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AL390774.1-201ENST00000411924 246 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 MTCO2P21-201ENST00000419780 677 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 MTATP6P17-201ENST00000431030 672 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 Z99714.1-201ENST00000450463 807 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 RPS15AP1-201ENST00000457423 391 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 RN7SL172P-201ENST00000460535 303 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 RPS4XP1-201ENST00000482189 787 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 PDCL3P4-201ENST00000489621 720 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN1Q9P244 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 HIGD1AP14-201ENST00000507617 282 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC109471.1-201ENST00000511631 612 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AP001207.1-201ENST00000524051 481 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC023050.2-201ENST00000544968 387 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AADACP1-206ENST00000561502 1193 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC006363.1-201ENST00000603806 463 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC069304.3-201ENST00000603938 1084 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AL162574.1-201ENST00000615702 950 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC013470.4-201ENST00000619978 986 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC011330.2-201ENST00000621680 635 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AP000676.4-201ENST00000624659 623 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN1Q9P244 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRFN1Q9P244 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 AL158152.1-201ENST00000602652 1435 ntBASIC5.06□□□□□ -1.6
LRFN1Q9P244 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.06□□□□□ -1.6
LRFN1Q9P244 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC016716.1-201ENST00000265882 708 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 NACA3P-201ENST00000359690 648 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 RNA5SP326-201ENST00000363209 110 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 RNA5SP335-201ENST00000363817 110 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 SNORD116-23-201ENST00000384645 92 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 RN7SKP279-201ENST00000411383 298 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 RPS24P7-201ENST00000416921 246 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 ELOCP9-201ENST00000418624 239 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 RPL12P18-201ENST00000437175 325 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 COX6CP18-201ENST00000448769 222 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC011979.1-201ENST00000472300 483 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 RPS21P4-201ENST00000487122 248 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 PRELID3BP5-201ENST00000508612 460 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 RNU6-202P-201ENST00000515998 96 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 SNORD116-26-201ENST00000516006 96 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 SCARNA16.4-201ENST00000516956 187 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms