Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 PIGPP2-201ENST00000411569 458 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC068533.2-201ENST00000411872 306 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 TPMTP3-201ENST00000411928 735 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 RPS6P23-201ENST00000413224 722 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC006366.1-201ENST00000422002 759 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC233981.1-201ENST00000423224 461 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AL049610.1-201ENST00000423374 372 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 MGAT2P2-201ENST00000427194 797 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC126120.1-201ENST00000431082 470 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC241584.1-201ENST00000438469 1241 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 RPS12P17-201ENST00000438591 377 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AL672138.1-201ENST00000450604 1015 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AP006222.1-205ENST00000450734 457 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 VN1R32P-201ENST00000452234 905 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 LTV1P1-201ENST00000510683 1237 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 SLC2A13P1-201ENST00000531560 322 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 OR7K1P-201ENST00000546439 926 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC091078.2-201ENST00000557145 559 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 SULT1C2P2-201ENST00000562517 294 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC006362.1-201ENST00000567392 174 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 ZNF322P1-201ENST00000568013 1209 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 ROCK1P1-201ENST00000573767 549 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 TXNP4-201ENST00000575018 310 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 MIR4310-201ENST00000582950 57 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 MIR3611-201ENST00000584484 83 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC095055.1-201ENST00000603472 1113 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 FAM27E4-201ENST00000605259 342 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AL355816.1-201ENST00000607951 118 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC012360.2-201ENST00000609349 391 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AL355974.3-201ENST00000617383 467 ntBASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TRIM39Q9HCM9 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 OR5BR1P-201ENST00000524992 1330 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 U3.4-201ENST00000363352 213 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 RPL23AP17-201ENST00000401064 499 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 CYCSP45-201ENST00000402289 315 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AL096800.1-201ENST00000405326 893 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 RN7SKP142-201ENST00000411236 328 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 PGBD4P8-201ENST00000412993 562 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AL136133.1-201ENST00000413694 376 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 IPPKP1-201ENST00000422501 768 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 BX323845.3-201ENST00000428215 527 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 TMX2P1-201ENST00000436507 708 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AC023141.8-201ENST00000442554 208 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AP000936.2-201ENST00000447151 681 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 SEPT7P3-201ENST00000455017 621 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AC104689.1-201ENST00000473356 768 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AL117351.2-201ENST00000513571 157 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 RNU6-488P-201ENST00000515918 99 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 MIR2117-201ENST00000516780 80 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 SNORA48.10-201ENST00000516965 160 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 TRIM51DP-201ENST00000529746 596 ntBASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM39Q9HCM9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms