Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GLUD1P3-202ENST00000508551 200 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC114781.4-201ENST00000513707 639 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 RNU6-1004P-201ENST00000516584 111 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 RNA5SP434-201ENST00000516647 121 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 IGLVIV-64-201ENST00000518581 301 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AP004247.1-201ENST00000531556 1289 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AL022154.1-201ENST00000604698 785 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AL096712.1-201ENST00000614561 159 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC016717.3-201ENST00000624730 554 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 OR5H6-203ENST00000642105 978 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AL133243.2-201ENST00000610331 1621 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC125336.1-201ENST00000508893 2827 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC007842.1-201ENST00000597336 2039 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 HMGB1P5-201ENST00000255320 642 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 TMSB4XP2-201ENST00000335179 210 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 RNA5SP375-201ENST00000362975 119 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 RNU6-452P-201ENST00000384406 107 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 MT-TP-201ENST00000387461 68 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 RNU6-244P-201ENST00000391028 104 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 CYCSP45-201ENST00000402289 315 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 OR8F1P-201ENST00000425243 930 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC242426.1-201ENST00000435270 960 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 ARL5AP2-201ENST00000444698 533 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 SDC4P-201ENST00000453285 601 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 FRG2FP-204ENST00000453982 852 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC104109.1-201ENST00000498563 436 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 RFPL4AP3-201ENST00000515267 345 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 RN7SKP298-201ENST00000515950 94 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 IGHV3-32-201ENST00000519182 355 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC078899.1-201ENST00000521432 1185 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC109635.3-201ENST00000529536 185 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 DEFB108A-201ENST00000530110 222 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC036111.2-201ENST00000533247 901 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC125612.1-201ENST00000547580 377 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC079905.1-201ENST00000549280 475 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AP005262.1-201ENST00000582646 997 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AC092681.3-201ENST00000609463 678 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AL080312.2-201ENST00000613001 630 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AL445670.1-201ENST00000618889 801 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 U6.107-201ENST00000637108 79 ntBASIC6.15□□□□□ -1.42
FOXP3Q9BZS1 AL079343.1-201ENST00000572358 1771 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms