Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 RPL12P38-202ENST00000588627 2319 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 OR11H13P-201ENST00000359695 979 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MIR525-201ENST00000384978 85 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 ATP5HP3-201ENST00000396994 486 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MRPL42P3-201ENST00000401492 326 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MIR1286-201ENST00000408112 78 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AL603650.1-201ENST00000412680 240 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 NANOGP6-201ENST00000429190 847 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 HMGB3P22-202ENST00000451823 572 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 Y_RNA.635-201ENST00000459041 101 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 RPL12P20-201ENST00000475538 479 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 RN7SL30P-201ENST00000488416 306 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 RN7SL193P-201ENST00000491708 276 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC112204.1-201ENST00000502591 103 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 SLC25A15P5-201ENST00000508033 253 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MTND5P4-201ENST00000514978 288 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 RNA5SP216-201ENST00000516111 123 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 CYCSP22-201ENST00000517555 339 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC120036.3-201ENST00000517826 292 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 KCTD9P6-201ENST00000522306 950 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC083923.1-201ENST00000523708 376 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC115621.1-201ENST00000604653 858 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 APOOP1-201ENST00000604695 592 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AL008723.3-201ENST00000608926 449 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC062037.2-201ENST00000610137 73 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC083806.3-201ENST00000614016 455 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AL355810.1-201ENST00000614629 552 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 AC068870.2-201ENST00000620635 389 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 U6.107-201ENST00000637108 79 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MAPK10-285ENST00000641207 2746 ntBASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL25A1Q9BXS0 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 CDY4P-201ENST00000418290 1513 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 Y_RNA.117-201ENST00000363294 101 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 RN7SKP174-201ENST00000363803 330 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 RNU6-1300P-201ENST00000391046 108 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 ATP5JP1-201ENST00000431631 322 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AL160004.2-201ENST00000432935 350 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 USP24P1-201ENST00000433802 779 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC023512.1-201ENST00000444513 499 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms