Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
VGLL1Q99990 NXF4-202ENST00000416098 1465 ntBASIC3.85□□□□□ -1.79
VGLL1Q99990 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VGLL1Q99990 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.85□□□□□ -1.79
VGLL1Q99990 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VGLL1Q99990 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.84□□□□□ -1.79
VGLL1Q99990 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.84□□□□□ -1.79
VGLL1Q99990 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
VGLL1Q99990 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.84□□□□□ -1.79
VGLL1Q99990 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 TMSB4XP4-201ENST00000323496 618 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VGLL1Q99990 RNU4-68P-201ENST00000364314 141 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 SNORD116-8-201ENST00000384365 95 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AL031985.1-201ENST00000392713 418 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.84□□□□□ -1.79
VGLL1Q99990 UBE2V1P11-201ENST00000411559 285 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.84□□□□□ -1.79
VGLL1Q99990 RPS3AP37-201ENST00000419176 745 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AL133325.1-201ENST00000421090 382 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.84□□□□□ -1.79
VGLL1Q99990 GTF2IP2-201ENST00000424290 697 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 ETF1P3-201ENST00000430422 1160 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 GAPDHP34-201ENST00000432112 823 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC023512.1-201ENST00000444513 499 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC004980.3-201ENST00000447046 365 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 RPL7L1P1-201ENST00000448259 785 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AL589880.1-201ENST00000448271 287 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.84□□□□□ -1.79
VGLL1Q99990 CALM1P2-201ENST00000452941 448 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 YWHAEP1-201ENST00000453697 763 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AL356981.1-201ENST00000454879 684 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 RPL7P45-201ENST00000455851 743 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 RPS27AP2-201ENST00000457576 465 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 RPL7AP28-201ENST00000464513 571 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC112206.1-201ENST00000468416 477 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 PRDX3P4-201ENST00000470828 747 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 PPIAP19-201ENST00000486414 492 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 RN7SL447P-201ENST00000494711 245 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.84□□□□□ -1.79
VGLL1Q99990 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC023050.2-201ENST00000544968 387 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC125612.1-201ENST00000547580 377 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC008126.1-201ENST00000549019 480 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 ZNF321P-202ENST00000550843 495 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC022404.1-201ENST00000555320 273 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 RN7SL176P-201ENST00000580352 264 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.84□□□□□ -1.79
VGLL1Q99990 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.84□□□□□ -1.79
VGLL1Q99990 AC021171.1-201ENST00000603137 706 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC015982.1-201ENST00000608113 465 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 SNORD91B-202ENST00000608459 222 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AL138478.1-201ENST00000612252 832 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC015914.2-201ENST00000618167 288 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AL512506.2-201ENST00000624472 458 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 AC017037.3-201ENST00000625016 472 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.84□□□□□ -1.79
VGLL1Q99990 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 CYP4F35P-202ENST00000636121 390 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VGLL1Q99990 MTND5P31-201ENST00000419366 1374 ntBASIC3.84□□□□□ -1.79
VGLL1Q99990 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VGLL1Q99990 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms