Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSX3Q99909 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX3Q99909 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX3Q99909 AC012020.1-201ENST00000624541 1728 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SSX3Q99909 METTL21EP-201ENST00000298105 713 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 RNU6-1005P-201ENST00000384519 107 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 MIR600-201ENST00000385007 98 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 DBIP1-201ENST00000401435 260 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.27□□□□□ -1.73
SSX3Q99909 RPL23AP48-201ENST00000406913 488 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AP000357.1-201ENST00000409926 1165 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 RN7SKP213-201ENST00000410746 298 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC004022.2-201ENST00000413824 193 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC016769.2-201ENST00000414815 475 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 OR2X1P-201ENST00000421144 687 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC005189.1-201ENST00000431286 310 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX3Q99909 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC105402.2-201ENST00000438503 358 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 CEACAMP7-201ENST00000444105 496 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC104634.1-201ENST00000452720 462 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC133473.1-201ENST00000455173 299 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 Z92846.1-201ENST00000456203 268 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 CYCSP34-201ENST00000458172 304 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC058823.1-201ENST00000485315 474 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX3Q99909 MTCO2P9-201ENST00000503214 694 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 GTF2F2P1-201ENST00000511083 675 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX3Q99909 SCARNA20.4-201ENST00000516969 131 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX3Q99909 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX3Q99909 CR383656.14-201ENST00000551951 406 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 OR11H3P-201ENST00000554547 982 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.27□□□□□ -1.73
SSX3Q99909 MIR3691-201ENST00000578066 90 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX3Q99909 AC092574.1-201ENST00000609771 420 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 SNX18P1Y-201ENST00000616231 511 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX3Q99909 ATE1-AS1-202ENST00000636460 506 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC083865.1-201ENST00000636634 831 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SSX3Q99909 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX3Q99909 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SSX3Q99909 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 MFSD8-220ENST00000641243 1422 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 AC007529.1-201ENST00000418574 2178 ntBASIC4.27□□□□□ -1.73
SSX3Q99909 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SSX3Q99909 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX3Q99909 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSX3Q99909 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSX3Q99909 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX3Q99909 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 AC092435.4-201ENST00000623012 4159 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AC134882.1-201ENST00000603738 1676 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SSX3Q99909 SNORA17.1-201ENST00000362945 126 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 U8.4-201ENST00000363626 134 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 RNU1-87P-201ENST00000363727 170 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 MTATP6P31-201ENST00000406985 692 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 MIR1303-201ENST00000408625 86 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 RN7SKP16-201ENST00000410180 299 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 RN7SKP126-201ENST00000411143 300 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 RPL23AP27-201ENST00000415161 451 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
SSX3Q99909 AL158050.1-201ENST00000416077 457 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.26□□□□□ -1.73
SSX3Q99909 RPS12P23-201ENST00000419579 400 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AC023128.2-201ENST00000420880 1223 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 UBE2D3P3-201ENST00000426992 425 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 RPL7P55-201ENST00000450522 746 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 RPL32P9-201ENST00000487963 407 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 RNA5SP373-201ENST00000517271 95 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AC012400.1-201ENST00000518452 381 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.26□□□□□ -1.73
SSX3Q99909 OR11J2P-201ENST00000555298 907 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms