Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPS26P30-201ENST00000443431 335 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 RNU7-27P-201ENST00000459281 62 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC092754.2-201ENST00000463506 460 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC074386.1-201ENST00000476560 767 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 RN7SL717P-201ENST00000478343 297 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC037198.2-201ENST00000478845 733 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC022215.1-201ENST00000481770 362 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 RNU6-759P-201ENST00000516740 103 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC084824.1-201ENST00000550917 1005 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AL031281.1-201ENST00000604049 488 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 BNIP3P4-201ENST00000604946 565 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC135507.1-201ENST00000607214 561 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AP000238.1-201ENST00000608759 426 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC109309.2-201ENST00000612597 332 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 RN7SL787P-201ENST00000613000 284 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 MIR6886-201ENST00000619864 61 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC079097.1-201ENST00000512187 1399 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC083843.2-201ENST00000568248 6253 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX18Q96RF0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 CASC19-206ENST00000641028 1430 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX18Q96RF0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX18Q96RF0 RNU6-1339P-201ENST00000363574 91 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 RNU4-24P-201ENST00000364565 139 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 SNORA62.2-201ENST00000364672 152 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 RNU6-157P-201ENST00000383957 107 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 RNU5A-2P-201ENST00000384337 116 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 RNU6-729P-201ENST00000384399 107 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 SNORD116-4-201ENST00000384733 96 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 MIR137-201ENST00000385223 102 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 RPS3AP2-201ENST00000407190 754 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 RPL21P43-201ENST00000425440 472 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 NANOGP4-201ENST00000427230 913 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 KCTD10P1-201ENST00000434203 625 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC073465.2-201ENST00000440938 498 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC064862.4-201ENST00000442180 334 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 GTF3AP5-201ENST00000442645 697 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 DNAJC19P8-201ENST00000452887 259 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AZGP1P2-201ENST00000454506 345 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 RN7SL273P-201ENST00000481561 299 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 MYL12BP2-201ENST00000503948 512 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 DUTP7-201ENST00000507982 486 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 RNU6-232P-201ENST00000517144 64 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 386.5 ms