Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 SNORA5.1-201ENST00000384275 131 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC007738.1-201ENST00000413892 348 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AP000563.1-201ENST00000490865 758 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 RN7SKP141-201ENST00000516167 338 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC119674.1-212ENST00000641155 993 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 MIR1251-201ENST00000408552 70 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 HPRT1P2-201ENST00000505250 544 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AL360270.2-201ENST00000562952 5985 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AL034370.1-201ENST00000397254 1590 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC136601.2-201ENST00000604356 474 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC135507.2-201ENST00000612443 309 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 RNA5SP439-201ENST00000617595 124 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC093671.1-201ENST00000624981 2929 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 SERPINA7P1-201ENST00000443077 631 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 RPS3AP14-201ENST00000483907 780 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC118465.1-201ENST00000513820 1271 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 RNA5SP116-201ENST00000516132 98 ntBASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.47□□□□□ -1.85
CSMD1Q96PZ7 AP000473.2-201ENST00000602659 1537 ntBASIC3.46□□□□□ -1.85
CSMD1Q96PZ7 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
CSMD1Q96PZ7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CSMD1Q96PZ7 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
CSMD1Q96PZ7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC012671.1-201ENST00000451912 203 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 CYCSP53-201ENST00000455540 265 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 MIR5187-201ENST00000583479 76 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 RN7SL807P-201ENST00000470923 297 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AL049874.2-201ENST00000492636 288 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 ATP1B1P1-201ENST00000509767 915 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC007458.1-201ENST00000542812 373 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AL049634.3-201ENST00000604968 457 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 Z98200.1-201ENST00000607298 470 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 IL6STP1-201ENST00000346911 1020 ntBASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.46□□□□□ -1.86
CSMD1Q96PZ7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms